Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq477 145 4e-30 >seq477 Length=240241 Score = 145 bits (160), Expect = 4e-30 Identities = 181/248 (73%), Gaps = 9/248 (4%) Strand=Plus/Plus Query 37856 AAAACTAACCCTACATCACGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGAT 37915 |||||||| || ||||| || | ||||| | || ||||||||| |||| | || Sbjct 223698 AAAACTAATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAAATTGAA 223757 Query 37916 AAGGCAGCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGT------AGAGAATGGA 37969 || || ||||| || |||||||| || | || || | ||| ||| ||| Sbjct 223758 AAAATGGCGTTGCCGCCATGTCATACTTTAATGCAATTTTATGTTTCAAAAGATAAT--- 223814 Query 37970 AAACTAAGCTGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAAT 38029 ||| |||| ||||| || |||||||||||||||||| | || ||||||||||| |||||| Sbjct 223815 AAATTAAGTTGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAAT 223874 Query 38030 ATTGCAAGCTATGCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGT 38089 |||||||| ||| ||||| | || ||| | | || || | ||||||||||||||| Sbjct 223875 ATTGCAAGTTATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGGT 223934 Query 38090 GAATTTGT 38097 || ||||| Sbjct 223935 GATTTTGT 223942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248802337481035