Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq142 91.5 2e-13 seq47 89.7 6e-13 seq34 86.0 8e-12 >seq142 Length=613757 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 22382 ATCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCTTTTTTCC 22441 ||||||| ||||| ||||| ||||| ||||| || ||||||||||| ||||| || | | Sbjct 53226 ATCACGGGGATGGCTATAAATTTGACGGTCCTGGACAAATTTTAGCACATGCCTTCTATC 53285 Query 22442 CTGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAATTGG 22491 | || |||| | ||||| ||||||||||| ||| || || |||||| Sbjct 53286 CGGGCGTTGGACGGGGAGGTGATGCTCATTTCGATGACGACGAGAATTGG 53335 >seq47 Length=1194842 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 171679 TGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGAAAAGAA 171738 ||||||| ||| | | |||||||||||| ||| ||||||||| | || | ||||| Sbjct 1117089 TGGAATGGTAACGCTAGTCGTGAATTTTTGGATAGATGCGGGTTCAGCGACCGTGAAGAA 1117148 Query 171739 GGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792 ||||| || || |||||||| || ||||||||| | ||| ||||| |||||| Sbjct 1117149 GGTGACTTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGCACAATAT 1117202 >seq34 Length=1404381 Score = 86.0 bits (94), Expect = 8e-12 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 50416 ATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTA 50475 ||||||||| || ||| ||||||| || ||||||||||| ||||||||||||||| Sbjct 26224 ATGAATTTATCTTGTACTTCCCCATATAACGCAGATTTTGATGGCGATGAAATGAATTTA 26283 Query 50476 CATGTTCCTCAATCATATGGAG-CTACTGCTGAA 50508 ||||| || ||||| ||||||| ||| |||||| Sbjct 26284 CATGTACCGCAATC-TATGGAGACTAGAGCTGAA 26316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512383347200