Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq565 111 4e-19 seq451 109 1e-18 seq161 89.7 1e-12 >seq565 Length=193464 Score = 111 bits (122), Expect = 4e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | || |||||||| |||||||||||||| ||| || || Sbjct 150859 CAAATATTTGTTAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAATCGTCGGAT 150800 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||||||||| || ||||| || ||||| ||| || ||| || Sbjct 150799 ACTATCGAAAACGTTAAAGCAAAA-ATCCAAGACAAGGAAGGTATTCCTCCAGACCAACA 150741 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | ||||| || ||||| ||||||||||| || | || ||| | ||||||||| | Sbjct 150740 GCGTTTGATCTTTGCTGGAAAACAGTTGGAAGACGGCCGCACGTTGTCTGATTACAACAT 150681 Query 206352 CCAGAAAGAGTCTAC 206366 |||||||| || || Sbjct 150680 ACAGAAAGAATCCAC 150666 Score = 102 bits (112), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| | || |||||||| |||||||||||||| ||| || || Sbjct 150631 CAAATATTTGTTAAAACTTTGACTGGAAAAACCATCACTTTGGAAGTAGAACCATCGGAT 150572 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||||||||| || ||||| || ||||| ||| || ||| || Sbjct 150571 ACTATCGAAAACGTTAAAGCAAAA-ATCCAAGACAAGGAAGGTATTCCTCCAGACCAACA 150513 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | || ||||| || || |||||||||||||| | || ||| | ||||||||| | Sbjct 150512 GCGTTTAATTTTCGCTGGCAAACAGTTGGAAGATGGCCGCACATTGTCTGATTACAACAT 150453 Query 206352 CCAGAAAGAGTCTAC 206366 || || || || || Sbjct 150452 ACAAAAGGAATCCAC 150438 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||| ||| || || || ||||| Sbjct 159572 AAAACATTAACTGGCAAAACTATCACTTTGGAAGTTGAACCGTCAGATACTATCGAAAAT 159513 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||||||||| || ||||| ||| || ||| ||| | | || || Sbjct 159512 GTTAAAGCCAA-GATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAACGTTTGATTTT 159454 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| ||||| ||||||| ||| | || ||| ||||||| || | ||||| ||||| Sbjct 159453 TGCCGGCAAGCAACTGGAAGACGGACGCACCTTGTCCGATTATAATATTCAGAAGGAGTC 159394 Query 206364 TAC 206366 || Sbjct 159393 AAC 159391 >seq451 Length=246926 Score = 109 bits (120), Expect = 1e-18 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || |||||| | || || ||| || ||| Sbjct 37992 CAGATTTTTGTAAAAACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCGGAC 37933 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| ||||| |||||||| || ||||| |||||| || ||| ||| Sbjct 37932 ACTATCGAAAATGTAAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCCGACCAGCAA 37873 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || ||||| |||||||| ||||||||||| | || ||| ||||||| || | Sbjct 37872 CGATTGATTTTCGCTGGAAAGCAATTGGAAGATGGTCGCACATTGTCCGATTATAATATT 37813 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 || ||||| || || | || ||||| ||| Sbjct 37812 CAAAAAGAATCCACATTACATCTTGTGTTG 37783 >seq161 Length=579164 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || ||||||||||| || ||| ||||| | ||| Sbjct 362435 AAAACTCTTACTGGCAAAACTATTACTTTGGAAGTTGAGCCTTCCGACACTATTGAAAAT 362376 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || |||||||| ||| || || ||| | | || ||| Sbjct 362375 GTCAAGGCCAAAATTCAGGATAAAGAAGGCATTCCTCCAGATCAACAACGTTTGATTTTC 362316 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| ||||||| | ||||| ||| | || || ||||| Sbjct 362315 GCTGGTAAACAATTGGAAGATGGGCGGACTTTATCGGATTATAACATACAAAAGGAGTCG 362256 Query 206365 AC 206366 || Sbjct 362255 AC 362254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181784534720795