Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq477 150 4e-31 >seq477 Length=240241 Score = 150 bits (166), Expect = 4e-31 Identities = 228/323 (71%), Gaps = 5/323 (2%) Strand=Plus/Plus Query 279261 ATCCATATGGCCGTCGCCACATTCTAAGTGCATGGAACGTTGGTGAGCTTGATGATATGA 279320 |||||||| |||||||| ||| | ||||| ||||| | ||| |||| | ||| Sbjct 223705 ATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAAATTGAAAAAATGG 223764 Query 279321 CGTTACCACCTTGTCATAGCTTTGTGCAATTTTGTGTAGTGCAAGGA----AAACTAAGC 279376 |||| || || ||||||| || ||||||||| ||| | || || ||| |||| Sbjct 223765 CGTTGCCGCCATGTCATACTTTAATGCAATTTTATGTT-TCAAAAGATAATAAATTAAGT 223823 Query 279377 TGTATTCTGCATCAACGCTCCGCTGATCTATTTTTAGGAGTTCCATTTAATATCAGTAGT 279436 ||| || ||||||| |||||| | |||||||| ||||| |||||||| ||| Sbjct 223824 TGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAATATTGCAAGT 223883 Query 279437 TACTCACTACTAACTCATATGATTGCACAAATTACTGGTTTAGATGTTGGTGAATTTATT 279496 || || | |||||||| | ||||| ||| || | || ||||| |||||||| ||| || Sbjct 223884 TATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGGTGATTTTGTT 223943 Query 279497 TGGAATGGTGGTGATTGTCACATTTATAAAAACCACGTTGAACAAGTAAAAGAACAACTA 279556 | | || ||||| || |||||||||||||| || |||||| || ||||| || Sbjct 223944 TACACATTAGGAGATTGCCATATTTATAAAAACCATTTTACACAAGTTAATGAACAGTTA 224003 Query 279557 CAGCGAAAACCTCGTGAATTACC 279579 ||| ||| || ||||||| Sbjct 224004 ACAAGAACACCACGCAAATTACC 224026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115136979926255