Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq1188 105 5e-18 seq1064 105 5e-18 seq1093 82.4 6e-11 >seq1188 Length=10746 Score = 105 bits (116), Expect = 5e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 9587 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAACCACT 9646 |||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||| || Sbjct 9308 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCTCT 9249 Query 9647 GAGCTAAGGGGCC 9659 ||||||| ||||| Sbjct 9248 GAGCTAAAGGGCC 9236 >seq1064 Length=27237 Score = 105 bits (116), Expect = 5e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 9587 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAACCACT 9646 |||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||| || Sbjct 26809 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCTCT 26750 Query 9647 GAGCTAAGGGGCC 9659 ||||||| ||||| Sbjct 26749 GAGCTAAAGGGCC 26737 >seq1093 Length=23860 Score = 82.4 bits (90), Expect = 6e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 9584 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAACC 9643 |||||| |||| ||||||||||||||| ||||| || ||||||| | |||||||||| Sbjct 8628 TGGTGGACCCTACTGGACTTGAACCAGTGACCATCCGGTTATGAGCCGGATGCTCTAACC 8687 Query 9644 -ACTGAGCTAAGGGGCC 9659 ||||||||||||| || Sbjct 8688 AACTGAGCTAAGGGTCC 8704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386865507428905