Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq1188 109 6e-19 seq1064 109 6e-19 seq1093 86.0 6e-12 >seq1188 Length=10746 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 103771 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACCACT 103830 |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || Sbjct 9308 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCTCT 9249 Query 103831 GAGCTAAGGGGCC 103843 ||||||| ||||| Sbjct 9248 GAGCTAAAGGGCC 9236 >seq1064 Length=27237 Score = 109 bits (120), Expect = 6e-19 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 103771 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACCACT 103830 |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| || Sbjct 26809 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCTCT 26750 Query 103831 GAGCTAAGGGGCC 103843 ||||||| ||||| Sbjct 26749 GAGCTAAAGGGCC 26737 >seq1093 Length=23860 Score = 86.0 bits (94), Expect = 6e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 103768 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 103827 |||||| |||| ||||||||||||||| ||||| || ||||||| || |||||||||| Sbjct 8628 TGGTGGACCCTACTGGACTTGAACCAGTGACCATCCGGTTATGAGCCGGATGCTCTAACC 8687 Query 103828 -ACTGAGCTAAGGGGCC 103843 ||||||||||||| || Sbjct 8688 AACTGAGCTAAGGGTCC 8704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505773657947800