Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq477 154 3e-32 >seq477 Length=240241 Score = 154 bits (170), Expect = 3e-32 Identities = 230/323 (71%), Gaps = 5/323 (2%) Strand=Plus/Minus Query 6085 GGTAATTCACGAGGTTTTCTCTGTAGTTGTTCTTTTACTTGTTCAACGTGGTTTTTATAA 6144 ||||||| || ||| |||| || ||||| || |||||| || |||||||||||| Sbjct 224026 GGTAATTTGCGTGGTGTTCTTGTTAACTGTTCATTAACTTGTGTAAAATGGTTTTTATAA 223967 Query 6145 ATGTGGCAATCACCACCATTCCAAATAAATTCACCAACATCTAAACCCGTAATTTGTGCA 6204 || |||||||| || | ||| ||| |||||||| ||||| || | || ||| ||| Sbjct 223966 ATATGGCAATCTCCTAATGTGTAAACAAAATCACCAACTTCTAATCCTGAAACTTGCGCA 223907 Query 6205 ATCATATGAGTTAGTAGTGAATAACTACTGATATTAAATGGAACTCCCAAAAATAGATCA 6264 || | |||||||| | |||||||| |||||||| ||||| || ||||| | |||| Sbjct 223906 ATTAAATGAGTTAACAACGAATAACTTGCAATATTAAAAGGAACACCTAAAAAAACATCA 223847 Query 6265 GCGGATCTTTGATGTAGAATG-CAGCTTAGT---TTCCCTTGTACTACACAAAATTGTAC 6320 || | ||||| | | || || |||| | || ||| | ||| ||||||| | Sbjct 223846 GCACTACGTTGATACA-ATTGACAACTTAATTTATTATCTTTTGAAACATAAAATTGCAT 223788 Query 6321 AAAGCTATGACAAGGTGGCAACGTCATATCATCAAGCTCACCAACGTTCCATGCACTTAG 6380 || ||||||| || ||||||| ||| | |||| ||| | ||||| ||||| | Sbjct 223787 TAAAGTATGACATGGCGGCAACGCCATTTTTTCAATTTCAGCTGGATTCCAAGCACTAAC 223728 Query 6381 AATATGGCGACGACCATATGGAT 6403 |||||||||||| |||||||| Sbjct 223727 AATATGGCGACGTGAATATGGAT 223705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113796221069960