Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014
-05-08] 2,395 sequences; 374,774,708 total letters
Query= NC_027399.1
Length=346602
Score E
Sequences producing significant alignments: (Bits) Value
seq477 105 1e-17
seq912 84.2 5e-11
>seq477
Length=240241
Score = 105 bits (116), Expect = 1e-17
Identities = 212/314 (68%), Gaps = 3/314 (1%)
Strand=Plus/Plus
Query 38252 TAAAAAATGATCCATATGGACGCCGACATATTCTAAGTGCATGGAATGTTGGTGAGCTTG 38311
|||||| | |||||||| ||| || |||||| | ||||| |||||| | ||| |||
Sbjct 223696 TAAAAACTAATCCATATTCACGTCGCCATATTGTTAGTGCTTGGAATCCAGCTGAAATTG 223755
Query 38312 ATGATATGGCTCTTCAACCATGTCATAGTTTTGTTCAATGGGTAGTT---AGTGATAATA 38368
| | ||||| | | |||||||||| ||| | |||| ||| | |||||||
Sbjct 223756 AAAAAATGGCGTTGCCGCCATGTCATACTTTAATGCAATTTTATGTTTCAAAAGATAATA 223815
Query 38369 AACTAAGTTGTATTCTGACCCAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAATA 38428
|| |||||||| || ||||| || ||| || || || ||||| | ||||
Sbjct 223816 AATTAAGTTGTCAATTGTATCAACGTAGTGCTGATGTTTTTTTAGGTGTTCCTTTTAATA 223875
Query 38429 TCACATCATATTCAGTACTCACCCATATGATAGCACAAATTACTGGATTAGAAGTTGGTG 38488
| || ||||| | | || ||| | || || ||| || | ||||||||||||||||
Sbjct 223876 TTGCAAGTTATTCGTTGTTAACTCATTTAATTGCGCAAGTTTCAGGATTAGAAGTTGGTG 223935
Query 38489 AATTTATCTGGAACGGTGGAGATTGTCATATTTACTTGAATCATATCGAACAAGTAAAAG 38548
| ||| | | | |||||||| |||||||| || ||| | |||||| || |
Sbjct 223936 ATTTTGTTTACACATTAGGAGATTGCCATATTTATAAAAACCATTTTACACAAGTTAATG 223995
Query 38549 AACAATTATCACGA 38562
|||| ||| || ||
Sbjct 223996 AACAGTTAACAAGA 224009
>seq912
Length=64277
Score = 84.2 bits (92), Expect = 5e-11
Identities = 106/144 (74%), Gaps = 4/144 (3%)
Strand=Plus/Plus
Query 49390 TTCTACTGGATGAAATTGAAAAAGCACATCCAAAAGTACTGCTGACATTCCT--ACAAGT 49447
|| || | |||||||||||||| || || || | | ||| | |||| | ||| |
Sbjct 8086 TTTTATTTGATGAAATTGAAAAGGCCCACCCCGATATCCTGA--ATATTCTTTTACAGAT 8143
Query 49448 ATTGGATGAAGGGCGTTTGACTGGTTCACAAGGAAAAACAGTTTACTTTAATAATATTAC 49507
|| || || || ||||| |||| ||| | ||||||||||||| | ||||| |||| |
Sbjct 8144 TTTAGAAGATGGTCGTTTAACTGATTCGCTAGGAAAAACAGTTGATTTTAAAAATACAAT 8203
Query 49508 TGTTATTATGACTACAAACCTTGG 49531
| ||||||||||| ||||| ||||
Sbjct 8204 TATTATTATGACTTCAAACATTGG 8227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108961169442605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |