Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1377 86.0 8e-12 >seq1377 Length=2913 Score = 86.0 bits (94), Expect = 8e-12 Identities = 215/321 (67%), Gaps = 12/321 (4%) Strand=Plus/Minus Query 11500 ATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCAAAGCCATCCATCTCGGT 11556 |||||| || ||||| || | ||||| | ||||| |||||||||||||| || Sbjct 1906 ATTAGTAGCAGCAATGACAATAATGC---TTTCATTTCCTTCAAAGCCATCCATTTCAAC 1850 Query 11557 GAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTG 11614 | | |||||| | |||||| ||||| ||||||| | || | | | | ||||| | Sbjct 1849 TAACATTTGATTTAATGTTTGCTCTCTTTCATCATGTCCT--CCTCCTAATCCAGCTCCT 1792 Query 11615 CGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGG 11674 | ||| || || || ||||| ||||| ||||| | |||||||||| | | | | Sbjct 1791 CTTTGACGTCCTACTGCGTCAATTTCATCGATGAATATAATACATGGTGCAGTCTTTTTG 1732 Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG 11734 || |||||| | ||| | || || ||||| || || |||||||| || || || Sbjct 1731 GCTTGTTCAAACATATCTCTCACTCTAGAAGCACCGACTCCTACAAACATTTCTACGAAA 1672 Query 11735 TTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAG 11793 | || | || | || | ||||| || |||| ||| || || |||||| || | Sbjct 1671 TCTGATCCTGA-AATTGTAAAAAATGGAACTTTTGCTTCTCCTGCAATGGCTTTTGCTAA 1613 Query 11794 GAGGGTCTTTCCCGTACCTGG 11814 || || ||||| || || || Sbjct 1612 AAGTGTTTTTCCTGTTCCGGG 1592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628013198292000