Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq37 82.4 9e-11 >seq37 Length=1463180 Score = 82.4 bits (90), Expect = 9e-11 Identities = 217/329 (66%), Gaps = 3/329 (1%) Strand=Plus/Minus Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 ||||| || || || ||||||||||||||||| || ||||| | || ||||||||| || Sbjct 1100181 GAGACCGGGACTCCTTACATGCTTTACAAAGATGCTTGTAATCGTAAAAGTAATCAACAG 1100122 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 ||| | || || || | || | |||||||||||| | |||| |||| Sbjct 1100121 AATGTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACATCACCT 1100062 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 || || | || || || || || || ||||| || | | || ||| ||| || Sbjct 1100061 GAAGAAATAGCAGTTTGCAATCTAGCCTCAATTGCGTTGAATATGTTCGTG--ACCACAG 1100004 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 | ||| | || ||||| | | |||||| | |||||| | || | | || | |||||| Sbjct 1100003 ATAAACA-ATATGATTTTCACAAACTCAAAGAAGTTGCCAAGCTTATAACAAGAAACCTC 1099945 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 105214 |||| | || ||| |||| || || | | | | || |||||| | | Sbjct 1099944 AACAAGATAATCGATGTCAATTACTATCCGCTGTCGGAAACCAGAAAGTCTAATTTTCGT 1099885 Query 105215 CACCGTCCAATTGGTCTCGGTGTTCAGGG 105243 || |||||||||||| | ||||| || || Sbjct 1099884 CATCGTCCAATTGGTTTAGGTGTCCAAGG 1099856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243338629800