Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq37 93.3 5e-14 >seq37 Length=1463180 Score = 93.3 bits (102), Expect = 5e-14 Identities = 185/269 (69%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548 ||||| | || |||||| | || | |||||||| ||||| || ||| |||| ||| Sbjct 1100568 GATGGCCTTGTTCCTATGTTGCGTCTGTTCAACAATGTTGCCCGTTATGTCGACCAAGGT 1100509 Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608 ||||| || || |||| | || || || ||| | ||||| ||||| || || || | Sbjct 1100508 GGTGGAAAACGTCCGGGGGCTTTTGCTATATACTTAGAGCCTTGGCATGCAGATATATTC 1100449 Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGA-GATGCGCTGC-CGTGACCTGT 53666 || |||||| | || |||| |||| | || || ||| || ||| || || | | Sbjct 1100448 GAATTTCTCAATTTGAAAAAGAATACGGGTAAAGAGGAAGAT-CG-TGCACGGGATTTAT 1100391 Query 53667 TTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGT 53726 || ||||||||||| ||||| || |||||| ||| || ||| || ||| | |||| Sbjct 1100390 TTTATGCTCTGTGGATACCGGATCTTTTCATGAAAAGAGTAGAGGCTGATGAGCATTGGT 1100331 Query 53727 ACCTGATGTGCCCGAACGAGTGCCCCGGC 53755 || ||||| || | | ||||| ||| Sbjct 1100330 CTCTAATGTGTCCCCATAAATGCCCTGGC 1100302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547199617721000