Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq477 98.7 1e-15 >seq477 Length=240241 Score = 98.7 bits (108), Expect = 1e-15 Identities = 181/260 (70%), Gaps = 9/260 (3%) Strand=Plus/Minus Query 144280 GCAATATTAAATGGCAAACCTAAGAACACGTCAACAGAACGTTGGTACCATTGTAAA-TC 144338 ||||||||||| || | |||||| || || ||| || |||||| ||| |||| || | Sbjct 223879 GCAATATTAAAAGGAACACCTAAAAAAACATCAGCACTACGTTGATACAATTGACAACTT 223820 Query 144339 AAG--ATGACCATTGCGAACGTTGAACTGGTAAAAACAATGACATGGCGGAAGAGCCATC 144396 || || | | || ||| | || || ||| |||||||||||| | ||||| Sbjct 223819 AATTTATTATCTTTTGAAACATAAAATTGCATTAAAGTATGACATGGCGGCAACGCCATT 223760 Query 144397 TTATTAATTTCTGCAGGGTTCCATGCAGAAACAATTTGACGACGGTCATTTGG--TAGTG 144454 || | |||||| || || ||||| ||| |||||| || ||||| || ||| |||| Sbjct 223759 TTTTCAATTTCAGCTGGATTCCAAGCACTAACAATATGGCGACGTGAATATGGATTAGTT 223700 Query 144455 TCTTAATTCGGT-TGATGATTTCTACAACCTGGTCGACACCACCAAAGTCTCGCCACTGT 144513 | | |||| | | ||| || | ||| || |||||| ||| | ||| || ||| Sbjct 223699 TTTAAATTATCTAACAAAATTGCT---AACTGATCAACACCATTAAAATTTCGTCATTGT 223643 Query 144514 TTCCCATATACAGGACCCAA 144533 |||||||||||||| ||||| Sbjct 223642 TTCCCATATACAGGTCCCAA 223623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545369272518600