Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq357 302 4e-77 >seq357 Length=326794 Score = 302 bits (334), Expect = 4e-77 Identities = 517/735 (70%), Gaps = 15/735 (2%) Strand=Plus/Plus Query 4354 TTTCACACTT-TAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATG 4412 |||| ||| | ||| ||| | ||| || || || ||| |||||||||| | | ||| Sbjct 32030 TTTCCCACCTCTAGTTCTAATAACAAACGATCGGCAACATATTCTATATATTTACACATA 32089 Query 4413 AGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCT 4472 ||||| ||| || |||||||| || |||| || | |||||||||||||| ||| Sbjct 32090 CTTTCGCTGTTCATGCCAATTAAGTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCA 32149 Query 4473 ATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAG 4532 || | ||||| ||||| ||||| || || ||||| ||||| | || || Sbjct 32150 ATTTTAACGGCATCTGTTATTATTTCCAAAATCCGTTCTTTGCTCGGTTTTTGTATCAAA 32209 Query 4533 TATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTC-TGCTAATCAGTTC 4591 | | ||||| ||| |||||| ||||| ||||| ||||| || | || || ||| ||| Sbjct 32210 TGTTTAAACATTAATACCGCAAATTCACAGTGCAAGCCTTCATCGCGTGATA-TCATTTC 32268 Query 4592 GTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAA 4651 ||||| |||||||| || ||||||| || | || || ||||||||||| | || || Sbjct 32269 ATTAGAGAACGTTAAACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAA 32328 Query 4652 TGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG- 4710 |||| ||||||||| ||||| ||||| || || |||| | || ||||| Sbjct 32329 GCTCCCACTAAAGAATATACCTTCGACGGCAGCGAAAGCTATAACACGTTCACCGAAATT 32388 Query 4711 AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA 4770 ||| | | | || |||| || |||||| | || || |||||||| | || | Sbjct 32389 AGCCGAATGCGATGATA-TCCAAGCTAGTGCCCATTCCGCCTTCTTCTTAACCAATGGCA 32447 Query 4771 TTGTGTATATAGCGTTAAATA-AT-TTACTTTT--TTCAAATGGGTCTTGAATATAAGTG 4826 |||| | || || ||||||| || || ||||| ||| || ||| ||||| || Sbjct 32448 TTGTCTCAATGGCATTAAATAGATATTCCTTTTCTTTCTCATC--TCTG--ATATATGTT 32503 Query 4827 TCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAA 4886 || || |||| ||||||||||| || |||| |||||| || ||||| ||||| || ||| Sbjct 32504 TCGATAAGTAAACTATACATTTCCGAGTGTACATTTTCCATGGCAATTTGAAACCCATAA 32563 Query 4887 AAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTT 4946 ||||| | ||||| |||| |||||| || | |||||| ||| ||||| || || || Sbjct 32564 AAGCAACGTGCTTCGGTTATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTA 32623 Query 4947 ACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCA 5006 || ||||| || || |||||||| |||||||| || || ||||| | ||||| || Sbjct 32624 ACAATACCATCGGATGCCGCAAAAAAAGCCAAAACGTGTGAAATAAAATGACGTTCGCCA 32683 Query 5007 -GGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065 ||||| ||||| | | | |||||||| | ||||||||||| ||||||| Sbjct 32684 TTACTTAA-CCGATTCCAATCGTCGATATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCA 32742 Query 5066 AAACGACGCTTCCGC 5080 ||| || |||||||| Sbjct 32743 AAAAGATGCTTCCGC 32757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427037134822535