Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq1006 96.9 9e-16 >seq1006 Length=36943 Score = 96.9 bits (106), Expect = 9e-16 Identities = 225/337 (67%), Gaps = 3/337 (1%) Strand=Plus/Minus Query 26641 CCAAGCATTTGCATGGTTCCACCAACGCCAACGATGACTTCGGTAGTGAACCGATCCTGT 26700 || ||||||||||| | ||| || ||| || || ||||| ||| | || ||| || Sbjct 10302 CCGAGCATTTGCATAGCACCATTAATGCCTACAATAACTTCTGTAATATACTTATCTTGA 10243 Query 26701 CTGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAACCT 26760 | |||| || |||||||||||||| | || | ||||| | ||| || | ||| ||| Sbjct 10242 CCATTTTGGTCTTGCCATTTTCTTGTTTGTAAGCTCCCTTCGATATATACTTGAGATCCT 10183 Query 26761 TTTCGCAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACACGGTGCCAC 26820 ||||| | ||| || | ||| ||||| || | ||| || || || || | |||||| Sbjct 10182 TTTCGTAAATATTCTCCGGCTATTTCAGCTAATTTTCCAAAAATAACTACTCTGTGCCAT 10123 Query 26821 TCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACT 26880 || || | || || ||||| || | ||||| ||||| ||| || || |||| Sbjct 10122 TCGGTTTTTTCTTTGATTTCTCCGGTATTTTTATCGCGCCAACTTTCAGATGTTGCAAGC 10063 Query 26881 GTAAGGTTTGCAAATGCCGTTCC-TGATGGGTGAATATCTGATTTCTGGATCATGCCCAA 26939 || | |||| || || |||| | | | || || | | ||||||| ||||| | Sbjct 10062 GTGATATTTGTAACGGCACTTCCATTAGGAATG--TAGCGTACATCTGGATTTTGCCCTA 10005 Query 26940 GGCGACCAATAATGATCACCTTATTTACGCCTCTGCT 26976 | ||||| | || || ||||| | ||||| || Sbjct 10004 AATGTCCAATTAAAATGACTTTATTAATTCCTCTACT 9968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129292322740950