Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq357 286 4e-72 seq680 95.1 1e-14 seq273 84.2 2e-11 >seq357 Length=326794 Score = 286 bits (316), Expect = 4e-72 Identities = 476/688 (69%), Gaps = 0/688 (0%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||| |||| ||||||| |||||| || ||| || || |||| | || Sbjct 32059 ATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAAGTCGAC 32118 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 ||| | || || || || ||||||||| ||| |||||| | ||||||| | Sbjct 32119 TGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTATTTCCAA 32178 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||||| || ||| | | | |||| ||||||| ||| ||||| ||||| Sbjct 32179 AATCCGTTCTTTGCTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGCAAATTCACA 32238 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 || | ||||||||| | |||| ||||||||| || ||||| |||||||||| ||| Sbjct 32239 GTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACGTTAAACCTGGCATTATTCC 32298 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| || | ||||||||| | ||| || || |||||| ||||| || || || Sbjct 32299 ACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTCCCACTAAAGAATATACCTTCGACGGC 32358 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 || || || | || |||| ||| || | || || || ||||| | || Sbjct 32359 AGCGAAAGCTATAACACGTTCACCGAAATTAGCCGAATGCGATGATATCCAAGCTAGTGC 32418 Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762 ||| | |||||| || || | ||||| ||||| || || || ||| | || Sbjct 32419 CCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAGATATTCCTT 32478 Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||||| | |||| | |||||||| || || ||||||||||||||||| || || | ||| Sbjct 32479 TTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTGTACATT 32538 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 ||| || ||||| |||||||||||||| || | ||||| | | |||||| || | | Sbjct 32539 TTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCTTCGGTTATTTGAACCTCTTGGGA 32598 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 ||||| || ||||||| || |||||||||||||| || ||||| ||||| | ||| Sbjct 32599 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAAAC 32658 Query 23943 ATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGA 24002 | | |||||||| | ||| || | ||| |||||||| | |||||||| || Sbjct 32659 GTGTGAAATAAAATGACGTTCGCCATTACTTAACCGATTCCAATCGTCGATATCTTTAGA 32718 Query 24003 TAAATCAACTTCATCAACTGTCCAAAAA 24030 | |||||||| || | ||||||||| Sbjct 32719 GAGGTCAACTTCTTCTGCAGTCCAAAAA 32746 >seq680 Length=148009 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 16540 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATCTGGGAAGTGC 16481 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||| ||| |||| | || ||||| ||||| ||||| Sbjct 16480 GAATATGGATTGGAGATCTTTGACCCAAGTTAAAGAGTTAGG 16439 >seq273 Length=439812 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 10483 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATCTGGGAAGTGC 10424 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAA 139521 || ||||| ||| |||| | || ||||| ||| Sbjct 10423 GAATATGGATTGGAGATCTTTGACCCAAGTCAAA 10390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521472387953000