Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20fuscipes_20fuscipes_20[genbank_20GCA_5F000671735.1_202014 -05-08] 2,395 sequences; 374,774,708 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq565 105 5e-18 seq383 95.1 9e-15 >seq565 Length=193464 Score = 105 bits (116), Expect = 5e-18 Identities = 169/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 44102 TATTT-CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTT 44160 ||||| |||||| || | || | ||| |||| || | ||| || || || ||||| Sbjct 150626 TATTTGCATTCCACCGCGGAGACGCAATACCAAATGCAATGTGGATTCTTTCTGTATGTT 150685 Query 44161 GTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTG 44220 |||||| | | ||| |||| |||| ||| || || ||||||||||||||||| || Sbjct 150686 GTAATCAGACAACGTGCGGCCGTCTTCCAACTGTTTTCCAGCAAAGATCAAACGCTGTTG 150745 Query 44221 ATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGG 44279 |||| ||| | ||||||||| || || || ||||| || | || | || || || | Sbjct 150746 GTCTGGAGGAATACCTTCCTTGTCTTGGAT-TTTTGCTTTAACGTTTTCGATAGTATCCG 150804 Query 44280 CGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || |||| || || || ||||| || | || || || || ||||||||| Sbjct 150805 ACGATTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTAACAAATATTTGCATG 150863 Score = 102 bits (112), Expect = 6e-17 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| || || || ||||||| | || || || |||| ||||| ||||| ||||||| Sbjct 159396 CTCCTTCTGAATATTATAATCGGACAAGGTG-CGTCCGTCTTCCAGTTGCTTGCCGGCAA 159454 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 | |||||||| ||||| |||| ||| | ||||||||| || ||||| |||| || Sbjct 159455 AAATCAAACGTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTG-GCTTTAACA 159513 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 || | || || || | | ||| || |||| || || || || || || | || || Sbjct 159514 TTTTCGATAGTATCTGACGGTTCAACTTCCAAAGTGATAGTTTTGCCAGTTAATGTTTTT 159573 Query 44324 ACGAAGATTTGCAT 44337 |||||||||||||| Sbjct 159574 ACGAAGATTTGCAT 159587 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || || || |||||||| || | |||| ||| | | |||| ||| || || |||||| Sbjct 150900 TCTTTCTGAATGTTGTAGTCAGAGAGTGTGCGGCCATTTTCCAACTGTTTGCCAGCAAAG 150959 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 |||||||| || ||||||| || ||||| | |||| | | | || | || || || Sbjct 150960 ATCAAACGTTGTTGATCTGGTGGGACACCCT-CTTTATCTTGAATTTTAGTTTTAACATT 151018 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || |||| | || ||||||| || || || ||||| || | |||||||| Sbjct 151019 CTCAATAGTATCGGATGGCTCAACCTCCAAGGTGATAGTTTTTCCAGTCAATGTCTTCAC 151078 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 151079 GAAGATCTGCAT 151090 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| ||||||||||| | | | ||| | || |||| ||| || || || || Sbjct 150444 TCCTTTTGTATGTTGTAATCAGACAATGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAA 150503 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-T 44265 || |||||||| || |||| ||| | ||||||||| || || || ||||| || | | Sbjct 150504 ATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGGAT-TTTTGCTTTAACGTT 150562 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || || || | | ||| || |||| || || || ||||| || | || || || Sbjct 150563 TTCGATAGTATCCGATGGTTCTACTTCCAAAGTGATGGTTTTTCCAGTCAAAGTTTTAAC 150622 Query 44326 GAAGATTTGCAT 44337 || |||||||| Sbjct 150623 AAATATTTGCAT 150634 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 |||||| || || |||||||||| | || || || |||| |||| || || || |||| Sbjct 159168 CTCCTTCTGAATATTGTAATCGGACAAGGTG-CGTCCGTCTTCCAATTGTTTGCCAGCAA 159226 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 |||||||||| || ||||||| || | |||||||| | | | | || || | | | Sbjct 159227 AGATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTAT-CTTGAATTTTAGCCTTGACG 159285 Query 44265 TTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTC 44323 ||| | || ||||||| | || || || | || || ||||| || || | || || Sbjct 159286 TTCTCAATTGTGTCGGAAGGCTCGACTTCTAAGGTGATGGTCTTGCCAGTCAATGTTTTG 159345 Query 44324 ACGAAGATTTGCATG 44338 ||||| ||||||||| Sbjct 159346 ACGAAAATTTGCATG 159360 >seq383 Length=330124 Score = 95.1 bits (104), Expect = 9e-15 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTC 44184 ||||||| || ||||| ||||||||||| || || || | | || || || | || Sbjct 43935 AACACCAAATGGAGCGTAGATTCCTTTTGGATATTATAGTCTGACAAGGTGCGGC-CATC 43877 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||||||||| |||||||| || || ||||| ||||||| ||| | |||| |||| Sbjct 43876 TTCCAGCTGCTTACCGGCAAAAATTAAGCGCTGTTGATCTGGAGGAATGCCTT-CTTTGT 43818 Query 44245 CGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 | | | || ||||| || |||| | || || || | || ||| || || | || || | Sbjct 43817 CTTGAATTTTTGCTTTAACGTTCTCAATAGTATCCGAGGGTTCTACTTCTAAAGTGATGG 43758 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || || || | || || || ||||| |||||| Sbjct 43757 TTTTACCTGTCAAAGTTTTTACAAAGATCTGCATG 43723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979892217715