Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4837 116 3e-21 >seq4837 Length=103144 Score = 116 bits (128), Expect = 3e-21 Identities = 373/567 (66%), Gaps = 10/567 (2%) Strand=Plus/Plus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| || || ||||| || | || || ||||||||| | |||||||| || ||||| Sbjct 5778 AAGAAGGCGACTTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGCAAAATATC 5837 Query 20273 TTGACATGAACACAAATTATTTTGG-AC--AAGGAGTAGATCAATTACAAAATGTTATTA 20329 || || | | | | || ||| || | ||||| |||||||| | | | |||| Sbjct 5838 GC-ACTTGT-CGCGA-TACTTATGGTACGGAGGGAGTCGATCAATTGAAGCAGATAATTA 5894 Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 ||| | || || || | || || | || ||||| | | | ||||| | || Sbjct 5895 GGACAATAACTACAAATCCTACTGATCGACGTATGATTTTGTCCTCTTGGAATCCAGTAG 5954 Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTT-TACGTTGCTAAT 20448 || | || |||||| || || || || ||| |||| ||| | || || || || ||| Sbjct 5955 ATATACCAAAAATGGCCTTACCACCCTGCCAT-TGCTTGGCCCAGTTCTATGTAGCCAAT 6013 Query 20449 AATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTC 20508 ||||| |||| |||||| | ||||| || || || ||||| |||||||| || || Sbjct 6014 AATGAGCTGTCATGTCAACTTTATCAGCGCAGTGCCGACATGGGGCTGGGTGTCCCATTT 6073 Query 20509 AATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACG 20568 ||||| ||| ||||| | | || | ||||||||||||| | || | | ||| | Sbjct 6074 AATATAGCATCGTATGCATTATTAACCTCTATGATTGCACATTTAACCGGCCTTAAACCA 6133 Query 20569 GGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTA 20628 || || || || ||||| | || || |||| ||||| | ||||| |||| || Sbjct 6134 GGCGATTTTGTACACACTACCGGCGATACGCACATTTATAAAACGCATATCCAACCATTG 6193 Query 20629 AAATTACAGTTAACACGACAACC-AAAACAATTCCCAACTCTTCGCATTACTCGAACTGT 20687 ||| || |||||||| |||| | || |||| || | | || | || | || Sbjct 6194 AAAGAGCAATTAACACGCAAACCGCATGCATTTCCTAAAT-TGATAATAAAACGTGCCGT 6252 Query 20688 TAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAA 20747 || ||||| | ||||| || |||||| | | | | ||||||||| || Sbjct 6253 AGAAAATATTGAGGATTTCAAGTACTCTGATTTCGAAATTGTGGATTATAATCCTTATCC 6312 Query 20748 TTCAATTCCAATGGAAATGTCTGTTTA 20774 ||||| |||||||||| ||||||| Sbjct 6313 AAAAATTCAAATGGAAATGGCTGTTTA 6339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399066893261095