Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq12580 104 3e-17 >seq12580 Length=40245 Score = 104 bits (114), Expect = 3e-17 Identities = 126/171 (74%), Gaps = 7/171 (4%) Strand=Plus/Plus Query 172381 ACCACTCTATCATATTATAGCCTAGAATTTCTAAATCTCCTCTTCTTGATTCAACACCTT 172440 |||||||||| |||||||| || | ||||||| || |||| || | | ||||||||| Sbjct 14752 ACCACTCTATTATATTATAACCCATTATTTCTAGGTCACCTCGCCTAGTTGCAACACCTT 14811 Query 172441 GATGGCTATCTCTGCTTGTATATTTTAATGTACCATTATGTGCTTTTTTAGGATCTGGTT 172500 |||| ||||||| |||||||| || || || ||||| ||||||||||||||||| Sbjct 14812 GATGAGCATCTCTGGATGTATATTCTATAGTTCCGTTATGCATTTTTTTAGGATCTGGTT 14871 Query 172501 GATAAA-----TGTTACTATAACGAGAACATAATCCAAAATCAACTAAATA 172546 |||| | || |||| |||| || ||| |||| |||||||| Sbjct 14872 --TAAAGTCTTTTTTCGTATAGTGAGATGCCAACCCATAATCGACTAAATA 14920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679609852344720