Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq9715 91.5 7e-14 >seq9715 Length=1611 Score = 91.5 bits (100), Expect = 7e-14 Identities = 196/291 (67%), Gaps = 4/291 (1%) Strand=Plus/Minus Query 66818 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTAC 66877 |||||| || || | ||||| | ||| || || ||||| | || || || | || Sbjct 743 CAGAAGCGTGGCGGAATCGCCGGTTTCATTGATGCAGAGCATGCGCTTGATCCGGTCTAT 684 Query 66878 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC--AGCCGGACACTGGCG 66935 || ||| ||||||| || ||||||| || | | ||| ||||||| | || | Sbjct 683 GCGAAGAATATCGGTGTTGATATCGACAATCT--TTATATTTCCCAGCCGGATAACGGTG 626 Query 66936 AGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCG 66995 ||||||| || |||||| ||| | || || || | | || ||||| ||| Sbjct 625 AGCAGGCACTTGAGATCACTGAGACGATGGTACGTTCCGGTGCGGTGGATATCGTGATCG 566 Query 66996 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 67055 |||||||||| || || || || ||| || ||| | || ||||| || || ||||||| Sbjct 565 TTGACTCTGTTGCAGCACTTGTCCCGAAGGCAGAGATTGAGGGCGATATGGGAGACAGTC 506 Query 67056 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTG 67106 | || || || || ||| | || ||||| ||||| | || || || |||| Sbjct 505 ATGTAGGTCTTCATGCGAGACTGATGTCTCAGGCACTTCGTAAACTTACTG 455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242783154943052