Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq4549 96.9 3e-15
>seq4549
Length=20005
Score = 96.9 bits (106), Expect = 3e-15
Identities = 159/229 (69%), Gaps = 3/229 (1%)
Strand=Plus/Minus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| ||||| || |||||||| |||||||||||||| | || || |||| |||
Sbjct 19687 ACCAAATGCAATGTCGACTCCTTCTGAATATTGTAATCAGACAAGGTGCGTCCGTCTTCC 19628
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
| || || || ||| |||| | | |||||||| ||| | || || ||||| |
Sbjct 19627 AATTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGA 19568
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
||||| || || | ||| |||||| || || ||| | ||||| |||||
Sbjct 19567 ATTTTAGCCTTAACATTTTCGATAGTATCCGATGGTTCAACTTCCAAAGTAATAGTTTTG 19508
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATTTT---AAATCTCTTATAAA 19058
|| ||||| ||||| ||||| ||||||||||| |||||| | | |||
Sbjct 19507 CCAGTTAATGTTTTTACAAAGATTTGCATTTTTTAAAATCTGTCAAAAA 19459
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| || |||| | || |||| ||||| || |||||||||||||| |||||||| |
Sbjct 19933 CCACCGCGCAGACGTAGGACCAAATGCAATGTCGACTCCTTTTGAATGTTGTAATCAGAT 19874
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| || |||| |||| || || || ||| |||| | | |||||||| |||
Sbjct 19873 AGGGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATCAAACGTTGCTGATCTGGGGGA 19814
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| || || ||||| |||||| || || | | | || ||| |||||| |
Sbjct 19813 ATACCTTCCTTGTCTTGAATTTTAGCCTTGACGTTTTCAATGGTGTCGGAAGGCTCGACT 19754
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| ||||| || || || || |||||||| |||||||||||
Sbjct 19753 TCTAGGGTGATGGTCTTGCCAGTCAATGTTTTGACGAAAATTTGCAT 19707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414451178720974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |