Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_005069.1 Length=46339 Score E Sequences producing significant alignments: (Bits) Value seq4703 262 1e-65 >seq4703 Length=1862 Score = 262 bits (290), Expect = 1e-65 Identities = 717/1091 (66%), Gaps = 18/1091 (2%) Strand=Plus/Plus Query 22297 ATTACTGGTGCACGTTTCATT-TCAAATTCTCCCAACGCGGCTTAATTAAGCGATTATAA 22355 || || || ||||| |||||| || ||| |||||| || || ||||| | |||| || Sbjct 79 ATAACAGGCGCACGCTTCATTATCTAAT-CTCCCAGCGTGGTTTAATCAGACGATCGAAA 137 Query 22356 ATTTCTGCACAAACCGGCTCCCAGATAGCCACAGCATTGCGCCAGGCATTTGGAGTACTA 22415 ||||| || || || ||||| |||| | |||||| | ||||||| | | | Sbjct 138 ATTTCATTGCAGACAGGTTCCCAAATAGAAAGAGCATTTCTCCAGGCACCAGTTGAAGAG 197 Query 22416 CGTTGGTTAGCGGCTTGTTCGAACACAGTTCGCATACGAACTTGTCCTTTACCTACTTCG 22475 ||||| | | ||| ||||| || ||||||| ||| || | || |||||||| ||||| Sbjct 198 CGTTGATCAATGGCCTGTTCAAAAACAGTTCTCATCCGGATCTGACCTTTACCAACTTCA 257 Query 22476 TCAGTTACTCGAACAACTTCTTTAAGGACCATGCTGCCCCAAGCATCACGTATATGGTCA 22535 || ||| | || ||||| | ||| || |||||||| ||||| ||||| || || || || Sbjct 258 TCCGTTTCACGTACAACATTTTTTAGAACCATGCTTCCCCAGGCATCCCGAATTTGCTCC 317 Query 22536 TCCATCCACTGAGATTGGCTACCAACAGCATTACTGAATTTAGTAATCAATACCCTAACA 22595 ||||||||| | || || ||| | ||| ||| |||| |||| ||| | | ||| Sbjct 318 TCCATCCACGGGGACTGAGAGCCATTACTATTGCTGTATTTGGTAAGCAAAATACGTACA 377 Query 22596 TCAGGCTCAAACCCGCCGAGGTCCAC--TCCAGCCATAAGATCACGCAACATAGTGAAAA 22653 |||||||| ||||| || || || || | | |||||||| | |||| ||||| Sbjct 378 TCAGGCTCGAACCCTTTAAGATCAACGTTCTTG--AGCAGATCACGAAGCATATCGAAAA 435 Query 22654 ATTGCAATGTGCTGACATAGTCATAAAGTTCAGCTGGAGTTGGTACAACAATGACATCAG 22713 | |||| || | | |||||| | | ||||| || || || |||| | ||||||| Sbjct 436 ACTGCAGTGCGGAGGTGTAGTCAAACAACTCAGCAGGCGTGGGAACAATCAGCACATCAG 495 Query 22714 CGGCACAAACCACATTTATTGTGCCTATGCCCAAGTTAGGTGCACTGTCTAAAACAACTA 22773 | ||||| || ||||| || ||||| || |||| |||||| || ||||| | ||| | | Sbjct 496 CAGCACATACGACATTAATCGTGCCGATACCCAGGTTAGGCGCGCTGTCAATAACTATGA 555 Query 22774 CGTCATAGCTGTCCCATACGGACTCGATTGCAGCACGTAGCATCATGTGCGGTGCTACAG 22833 | |||||| | || | || || || || ||||||| ||| || | | Sbjct 556 CATCATAGTCATGAGCAACAGTTTCAATGGCCAGTCGGAGCATCAGGTGTGGATCGGTGG 615 Query 22834 GGAGCTTTTCGGCATCA----TGCAAAGGATATAATTCAGACTCAATTCGATGGATGGCC 22889 | || || | ||||| ||| | ||| |||| ||||| || || | ||| Sbjct 616 GCAGTTTACCTTCATCAAATTTGCCCA----TTAACTCAGTTTCAATACGGTGCAGAGCC 671 Query 22890 AGACAGGATGGGATTATGTCCAGATTTGGCCAACATGTTGGTTTGATGGCGTACATAGCA 22949 |||||||| || || ||||| || ||||| || || || || || || || | || Sbjct 672 AGACAGGAAGGAATAATGTCAAGCCCCGGCCAGCAAGTGGGCTTTATTGCATAAGTGACA 731 Query 22950 TCATCACGTTCACCTAAGTAATAAGGGAGTAGAGTTTCGTCTTCGTGGATATGCAAATCA 23009 || || ||| || | || |||| || ||||| || ||| | || ||||| | ||| Sbjct 732 TCGTCCTTTTCCCCAAGATAGAAAGGCAGGAGAGTGTCTTCTGCATGAATATGAAGATCT 791 Query 23010 GGTACATACCCATGATAAAGGCTGGCGGTAGCTTGCGGATCTGTAGCATCAATCAATAGT 23069 ||||| | || ||||| | ||| || | || || || || | || | | | Sbjct 792 GGTACCCATCCGTGATACATTGAGGCTGTTCCCTGGGGGTCGTTACCTTCCACGAGCAAA 851 Query 23070 ACGCGTAAGCCCTGCAATGCTAACCATTGAGCTGTATGCACTGAGGTACT--TGTTTTGT 23127 || |||| |||| || || | ||||| ||| || || ||| ||||||| Sbjct 852 ACACGTAGCCCCTTCAGAGCCAGATCCTGAGCAAGATGAAC--AGAAACTGAGGTTTTGT 909 Query 23128 ATGCGCCACCTTTATGTGCCGCTATAGCCAATACTACTGGGTCTTGCCCATCAGGTCGTT 23187 | ||||||||||||| || || | | | || ||| | | |||| ||| Sbjct 910 AAACGCCACCTTTATGGGCAGCAACCCCGATCACCGGTGGAAATACGTCTTCAGCACGTC 969 Query 23188 TCCAGCGTGTACCAAAATGATCCCGAAGGTCGTTAATTTGTTGAATCGTATATCCCGCTC 23247 | | || |||||||| ||| || | | |||||||||| ||| ||||| || | | Sbjct 970 GCAATCGCGTACCAAACACATCACGCATATGATTAATTTGTTCAATTGTATAACCAACAC 1029 Query 23248 TTTGTGGCACTCTGCCACGTGTAACCATATCCGCAGGTGGCAATTTTCCTGAGTCCTCGC 23307 ||| || | || || | ||||||||| | || | | |||| | |||| Sbjct 1030 GTTGCTCAACCCGTCCTCGAATTTCCATATCCGGGTGCGGTAGTCGCCCTGCTTTCTCGG 1089 Query 23308 CATTGCGGATGGTCTGAGGGGTTACACCAACTAATTCTGCAGCTTCAGTAATACCCCATC 23367 ||| | ||| | ||||| | || |||||||| || || |||||| || | ||| | Sbjct 1090 CATCTCTGATAGCCTGAGAAGAAACCCCAACTAAATCCGCTGCTTCACCTATTCTCCAGC 1149 Query 23368 GACGAGTGATT 23378 | || || ||| Sbjct 1150 GCCGGGTTATT 1160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148120848567902