Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq2327 136 8e-28 seq2635 122 2e-23 seq4739 116 7e-22 seq17962 114 3e-21 seq5223 113 9e-21 seq3871 113 9e-21 seq1037 107 4e-19 seq12308 100 6e-17 seq3872 91.5 3e-14 seq17095 89.7 1e-13 seq2087 89.7 1e-13 >seq2327 Length=2114 Score = 136 bits (150), Expect = 8e-28 Identities = 285/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| || | ||| |||| ||||||||||||||| || | || | | Sbjct 1493 ACATGATCATTGTATACATGTTTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 1434 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 1433 TTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 1374 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | ||||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 1373 CAATCAACGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 1314 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTT---CAGGCTTGATT 7521 || ||||| || |||||||| | || | || || || ||| | ||| || Sbjct 1313 CATATTACATCATCGAATATCATTATTGAATGTGGTTTTGC--CTTAGATATACTT-ATA 1257 Query 7522 ACAGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTC 7581 || ||||| ||| |||||| || || ||||| | ||| ||| | ||||||| Sbjct 1256 ACTTTTTCATTTTCTGAGAATGTAAATAAGTTTATACCCTTTATCGGTTCGATCAGTGTC 1197 Query 7582 TCCAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAAC 7641 | ||| | |||| |||||||||| | ||| || || || | || || || | ||| Sbjct 1196 TGCAGATAATGATGTTTTGGTTGGTATAAAGATTTCGAATATATGTAGATGTTTTTAAAA 1137 Query 7642 CTCAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGAT 7701 || | || || ||| | | || ||| | || | |||| ||||| ||||| ||||| Sbjct 1136 CTGAGCCCATTAGGACTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGAC 1077 Query 7702 GG 7703 || Sbjct 1076 GG 1075 >seq2635 Length=2538 Score = 122 bits (134), Expect = 2e-23 Identities = 286/428 (67%), Gaps = 3/428 (1%) Strand=Plus/Plus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| | |||||| ||| ||||||||||||||| || | || | | Sbjct 1159 ACATGATCATTGAATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 1218 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 1219 TTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 1278 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 1279 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 1338 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCT-TGATTAC 7523 || ||||| || |||||||| | || | || || || | | | || | || || Sbjct 1339 CATATTACATCATCGAATATCATTATTGAATGTGGTTTTGCCT-TAGATACTCTTATAAC 1397 Query 7524 AGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTCTC 7583 ||||| ||| |||||| || || || || | ||| | | || ||||||| Sbjct 1398 TTTTTCATTTTCTGAGAATGTAAATAAGTTTATCCCCTTTATCGGATCAATTAGTGTCTG 1457 Query 7584 CAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAACCT 7643 ||| | |||| |||||||| | ||| || || || | ||| || || | ||| || Sbjct 1458 CAGATAACGATATTTTGGTTGAAATAAAGATTTCGAATATATATAGATGTTTTTAAAACT 1517 Query 7644 CAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGATGG 7703 | ||| || || | | || ||| | || | |||| ||||| ||||| ||||| || Sbjct 1518 GAGACCATTAGGGCTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGACGG 1577 Query 7704 -CCCGCAA 7710 ||| ||| Sbjct 1578 TCCCACAA 1585 >seq4739 Length=10444 Score = 116 bits (128), Expect = 7e-22 Identities = 285/428 (67%), Gaps = 3/428 (1%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| || |||||| ||| ||||||||||||||| || | || | Sbjct 2702 ACATGATCATTGTATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCGTA 2643 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||| | | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 2642 TTTGCATTACCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 2583 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 2582 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATGTCTTATAGTATTTTGTTTGTCG 2523 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGC-TTGATTAC 7523 || |||||||| |||||||| | || | || || || | | | | ||| || Sbjct 2522 CATATTACATCGTCGAATATCATTATTGAATGTGGTTTTGCCT-TAGATACGACGATAAC 2464 Query 7524 AGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTCTC 7583 ||||| ||| |||||| || || ||||| | ||| | | | || ||||| Sbjct 2463 TTTTTCATTTTCTGAGAATGTAAATAAGTTTATACCCTTTATCGGATCGATCACTGTCTG 2404 Query 7584 CAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAACCT 7643 ||| | |||| |||||||| | | ||| || ||||| | || || || | ||| || Sbjct 2403 CAGATAACGATATTTTGGTTGATATAAAGATTTCGAGTATATGTAGATGTTTTTAAAACT 2344 Query 7644 CAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGATGG 7703 | || || | | | | || ||| | || | |||| ||||| ||||| ||||| || Sbjct 2343 GAGCCCATTAGTACTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGACGG 2284 Query 7704 -CCCGCAA 7710 ||| ||| Sbjct 2283 TCCCACAA 2276 >seq17962 Length=1318 Score = 114 bits (126), Expect = 3e-21 Identities = 286/430 (67%), Gaps = 7/430 (2%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| | |||||||||| ||||||||||||||| || | || | | Sbjct 430 ACATGATCATTGAATATATGCTTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 371 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 370 TTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 311 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| ||||| || || || | | || || ||||| || Sbjct 310 CAATCAATGTGCTTATGTCTCCCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 251 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTT---CAGGCTTGATT 7521 || ||||| || |||||||| | || | || || || ||| | ||| || Sbjct 250 CATATTACATCATCGAATATCATTATTGAATGTGGTTTTGC--CTTAGATACACTT-ATA 194 Query 7522 ACAGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTC 7581 || ||||| ||| |||||| || || || || | ||| | | || |||||| Sbjct 193 ACTTTTTCATTTTCTGAGAATGTAAATAAGTTTATCCCCTTTATCGGATCAATTAGTGTC 134 Query 7582 TCCAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAAC 7641 | ||| | |||| |||||||| | ||| || || || | ||| || || | ||| Sbjct 133 TGCAGATAACGATATTTTGGTTGAAATAAAGATTTCGAATATATATAGATGTTTTTAAAA 74 Query 7642 CTCAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGAT 7701 || | || || || | | || ||| | || | |||| ||||| ||||| ||||| Sbjct 73 CTGAGGCCATTAGGGCTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGAC 14 Query 7702 GG-CCCGCAA 7710 || ||| ||| Sbjct 13 GGTCCCACAA 4 >seq5223 Length=280038 Score = 113 bits (124), Expect = 9e-21 Identities = 284/428 (66%), Gaps = 3/428 (1%) Strand=Plus/Plus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 ||||||| || || |||||| ||| ||||||||||||||| || | || | Sbjct 202291 ACATGATTATTGTATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCGTA 202350 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||| | | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 202351 TTTGCATTACCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 202410 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 202411 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 202470 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGC-TTGATTAC 7523 || |||||||| |||||||| | || | || || || | | | | ||| || Sbjct 202471 CATATTACATCGTCGAATATCATTATTGAATGTGGTTTTGCCT-TAGATACGACGATAAC 202529 Query 7524 AGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTCTC 7583 ||||| ||| |||||| || || ||||| | ||| | | | |||| || Sbjct 202530 TTTTTCATTTTCTGAGAATGTAAATAAGTTTATACCCTTTATCGGATCGATTAGTGCCTG 202589 Query 7584 CAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAACCT 7643 ||| | |||| |||||||| | | ||| || || || | ||| || || | ||| || Sbjct 202590 CAGATAACGATATTTTGGTTGATATAAAGATTTCGAATATATATAGATGTTTTTAAAACT 202649 Query 7644 CAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGATGG 7703 | ||| || || | | || ||| | || | |||| ||||| ||||| ||||| || Sbjct 202650 GAGACCATTAGGGCTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGACGG 202709 Query 7704 -CCCGCAA 7710 ||| ||| Sbjct 202710 TCCCACAA 202717 >seq3871 Length=49806 Score = 113 bits (124), Expect = 9e-21 Identities = 284/428 (66%), Gaps = 3/428 (1%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| | |||||| ||| ||||||||||||||| || | || | | Sbjct 45188 ACATGATCATTGAATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 45129 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || ||||| |||| ||| | |||||||| | ||| ||| Sbjct 45128 TTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTACATGTTTGACATAAATAAAAG 45069 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 45068 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 45009 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAG-CATCTTCAGGCTTGATTAC 7523 || ||||| || |||||||| | || | || || | | | | ||| || || Sbjct 45008 CATATTACATCATCGAATATCATTATTGAATGTGGTTTTGACTTAGATACACTT-ATAAC 44950 Query 7524 AGCTTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTCTC 7583 ||||| ||| |||||| || || ||||| | ||| | | | |||||||| Sbjct 44949 TTTTTCATTTTCCGAGAATGTAAATAAGTTTATACCCTTTATCGGATCGATCAGTGTCTG 44890 Query 7584 CAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAACCT 7643 ||| | |||| |||||||| | | ||| || |||| | || || || | ||| || Sbjct 44889 CAGATAACGATATTTTGGTTGATATAAAGATTTCAAGTATATGTAGATGTTTTTAAAACT 44830 Query 7644 CAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGATGG 7703 | ||| || || | | || || | || | |||| ||||| ||||| ||||| || Sbjct 44829 GAGACCATTAGGGCTTTCTATTAGGCTAATCATAACATTTGTCTTGCCACAATTTGACGG 44770 Query 7704 -CCCGCAA 7710 ||| ||| Sbjct 44769 TCCCACAA 44762 Score = 84.2 bits (92), Expect = 4e-12 Identities = 230/345 (67%), Gaps = 8/345 (2%) Strand=Plus/Minus Query 5308 TAAACTCTCGCCACATT-TTCGTCTTAAGTGTTCTATTGAAACGTTCACATATGGATGCT 5366 |||||||| |||||| ||| | |||| ||| ||||| |||||||| ||| || || Sbjct 48433 TAAACTCTTTCCACATCATTCCTTTTAA-TGTCCTATTAAAACGTTCTACTATAGACGCC 48375 Query 5367 TTGAGATTGCTGAATGTTGAATACAGATTTAT-CTTGTGCTGCTTCATCAGATCTTTGAA 5425 || | | ||| |||||||||| |||| || | |||| | ||||| | | || Sbjct 48374 TTCAAAACGCTATATGTTGAATAGTGATTAATACGATTGCTT-TGCATCAATTGATGAAA 48316 Query 5426 TTCTTTGTTGTAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGAT---ACGACC 5482 || || ||| ||||||||||||| | |||| || | || || ||| | | ||| Sbjct 48315 TTGCTTATTGAAAAACTCTTTACCATCATCAGTTTGCAAGTTTTTCGGGTTGCGATGACT 48256 Query 5483 TTGCTGAAGTACAGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGG 5542 || | || | |||||||||| |||| || | | | || |||| || | | Sbjct 48255 TTTCACAAAAATTTCCTTCATAGCATTTGTTACGT-TTGAGCAGTTTTGTTTTTCACCGC 48197 Query 5543 AACTGCCCAGGCATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTT 5602 | ||||| || | ||| |||||| ||||||| | ||| | || || || || || Sbjct 48196 CATAGCCCAAGCCTTTTTCGAAAATGTATCTATTACTGTTAAAAGGTAACGATAACCATT 48137 Query 5603 ATTGACTGTTGCATATGGAATCATCTCAACCAAGTCAGCTTGCCA 5647 ||| | |||||| ||||| ||||||| || |||||||| Sbjct 48136 ATTTTGCGCTGCATAACTTATCATTTCAACCAGATCGGCTTGCCA 48092 >seq1037 Length=1731 Score = 107 bits (118), Expect = 4e-19 Identities = 286/430 (67%), Gaps = 9/430 (2%) Strand=Plus/Plus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| || |||||| ||| ||||||||||||||| || | || | | Sbjct 556 ACATGATCATTGTATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 615 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 |||||||||| | || | || ||||| |||| ||||| |||||||| | ||| ||| Sbjct 616 ATTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTATATGTTTGACATAAATAAAAG 675 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| ||||| || || || | | || || ||||| || Sbjct 676 CAATCAATGTGCTTATGTCTACCCA-ACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 734 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCTTGATTACA 7524 || |||||||| |||||||| | || | || ||||| ||| || | ||||| Sbjct 735 CATATTACATCGTCGAATATCATTATTGAATGTGGTTTAGC--CTT-AGATATACTTACA 791 Query 7525 GC---TTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTC 7581 | ||||| ||| |||||| || || ||| | | ||| | | | |||| | Sbjct 792 ACTTTTTCATTTTCTGAGAATGTAAATAAGTTTATATCCTTTATCGGATCGATTAGTG-C 850 Query 7582 TCCAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAAC 7641 ||| | |||| |||||||| | | ||| || || || | ||| || || | ||| Sbjct 851 CGCAGATAACGATATTTTGGTTGATATAAAGATTTCGAATATATATAGATGTTTTTAAAA 910 Query 7642 CTCAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGAT 7701 || | ||| | || | | || ||| | || | |||| ||||| ||||| ||||| Sbjct 911 CTGAGACCATGAGGGCTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGAC 970 Query 7702 GG-CCCGCAA 7710 || ||| ||| Sbjct 971 GGTCCCACAA 980 >seq12308 Length=75557 Score = 100 bits (110), Expect = 6e-17 Identities = 283/430 (66%), Gaps = 16/430 (4%) Strand=Plus/Minus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| || |||||| ||| ||||||||||||||| || | | | | Sbjct 7371 ACATGATCATTGTATATATGCCTCACATTCATTTCATCTTGTTTAAATATTATTATCATA 7312 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || |||| |||| ||||| |||||||| | ||| ||| Sbjct 7311 TTTGCATTATCACGTATTAAATGTTTGGTAATTCTCGTATATGTTTGACATAAATAAAAG 7252 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 7251 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 7192 Query 7465 CAAGCAACATCGTCAAATATCATCAAGGAGTTAGGCTTAGCATCTTCAGGCTTGATTACA 7524 || |||||||| |||||||| | || | || || || ||| || ||||| Sbjct 7191 CATATTACATCGTCGAATATCATTATTGAATGTGGTTTTGC--CTT-AGATACACTTACA 7135 Query 7525 GC---TTCATGTTCGCTGAATGTGAAGAATCCAATACCATCAATCTGTTTAAGCAGTGTC 7581 | || || ||| |||||| || || ||||| | ||| | | | |||||| Sbjct 7134 ACTTTTTAATTTTCTGAGAATGTAAATAAGTTTATACCCTTTATCGGATCGATTAGTGTC 7075 Query 7582 TCCAGGAACTGATACTTTGGTTGGTTAAGAGACTTTGAGTAAAGATATATATTCTCAAAC 7641 | ||| | |||| ||||||| || || || || | ||| || || | ||| Sbjct 7074 TGCAGATAACGATA-TTTGGTT--------GATTTCGAATACATATAGATGTTTTTAAAA 7024 Query 7642 CTCAAACCGTTTGGATGTACAATAAGAGACAGCAGAGCATTCGTCTTTCCACAGTTTGAT 7701 || | ||| || || | | || ||| | || | |||| ||||| ||||| ||||| Sbjct 7023 CTGAGACCATTAGGGCTTTCTATTAGACTAATCATAACATTTGTCTTGCCACAATTTGAC 6964 Query 7702 GG-CCCGCAA 7710 || ||| ||| Sbjct 6963 GGTCCCACAA 6954 >seq3872 Length=3593 Score = 91.5 bits (100), Expect = 3e-14 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 7285 ACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAG 7344 |||||||||| | |||||| ||| ||||||||||||||| || | || | | Sbjct 3353 ACATGATCATTGAATATATGCCTCACATTCATTTCATCTTGTTTAAATATTACTATCATA 3412 Query 7345 TTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAG 7404 ||||||||||| | || | || ||||| |||| ||| | |||||||| | ||| ||| Sbjct 3413 TTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTACATGTTTGACATAAATAAAAG 3472 Query 7405 CTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCA 7464 | |||| | ||| |||| |||||| || || || | | || || ||||| || Sbjct 3473 CAATCAATGTGCTTATGTCTACCCATACAAAAGTAATTTCTTATAGTATTTTGTTTGTCG 3532 Query 7465 CAAGCAACATCGTCAAATATCAT 7487 || ||||| || |||||||| Sbjct 3533 CATATTACATCATCGAATATCAT 3555 Score = 84.2 bits (92), Expect = 4e-12 Identities = 229/345 (66%), Gaps = 7/345 (2%) Strand=Plus/Plus Query 5308 TAAACTCTCGCCACATT-TTCGTCTTAAGTGTTCTATTGAAACGTTCACATATGGATGCT 5366 |||||||| |||||| ||| | |||| ||| ||||| |||||||| ||| || || Sbjct 116 TAAACTCTTTCCACATCATTCCTTTTAA-TGTCCTATTAAAACGTTCTACTATAGACGCC 174 Query 5367 TTGAGATTGCTGAATGTTGAATACAGATTTAT-CTTGTGCTGCTTCATCAGATCTTTGAA 5425 || | | ||| |||||||||| |||| || | |||| | ||||| | | || Sbjct 175 TTCAAAACGCTATATGTTGAATAGTGATTAATACGATTGCTT-TGCATCAATTGATGAAA 233 Query 5426 TTCTTTGTTGTAAAACTCTTTACCCTGATCAACATGGAGATTCTTAGGGAT---ACGACC 5482 || || ||| ||||||||||||| | |||| || | || || ||| | | ||| Sbjct 234 TTGCTTATTGAAAAACTCTTTACCATCATCAGTTTGCAAGTTTTTCGGGTTGCGATGACT 293 Query 5483 TTGCTGAAGTACAGACTTCATAGCACTTGTGACATCTACACCACTTTTAGACTTAATTGG 5542 || | || | |||||||||| |||| || | | | || |||| || | | Sbjct 294 TTTCACAAAAATTTCCTTCATAGCATTTGTTACGTTTTGAGCAGTTTTGTTTTTCACCGC 353 Query 5543 AACTGCCCAGGCATATTTTGAAAATATATCTATGATTGTAAGCAGATACTTGTATCCTTT 5602 | ||||| || | ||| |||||| ||||||| | ||| | || || || || | Sbjct 354 CATAGCCCAAGCCTTTTTCGAAAATGTATCTATTACTGTTAAAAGGTAACGATAACCGCT 413 Query 5603 ATTGACTGTTGCATATGGAATCATCTCAACCAAGTCAGCTTGCCA 5647 ||| | |||||| ||||| ||||||| || |||||||| Sbjct 414 ATTTTGCGCTGCATAACTTATCATTTCAACCAGATCGGCTTGCCA 458 >seq17095 Length=2409 Score = 89.7 bits (98), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 11/231 (5%) Strand=Plus/Plus Query 7213 ACCACAAATCCATATTTAT---TCCAACATGCCGAGCATAAATCTCTGAATGAGTTGT-- 7267 || ||||| |||||||||| ||||||| | | | ||||| | || | || | Sbjct 1762 ACAACAAAACCATATTTATCTTTCCAACACGT--ATTACAAATCGTTAAAA-ACTTCTTA 1818 Query 7268 -ATGGCATGTC-CGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTG 7325 ||||||| || | ||| ||||| |||| | |||||| ||| ||||||||||||||| Sbjct 1819 AATGGCATATCACCGATT-ACATGGTCATTGAATATATGCCTCACATTCATTTCATCTTG 1877 Query 7326 ACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATA 7385 || | || | | ||||||||||| | || | || ||||| |||| ||||| Sbjct 1878 TTTAAATATTACTATCATATTTGCATTATCACGTATTAAATGTTTGGGAATTCTCGTATA 1937 Query 7386 AGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAA 7436 |||||||| | ||| |||| |||| | ||| |||| |||||| || || Sbjct 1938 CGTTTGACATAAATAAAAGCAATCAATGTGCTTATGTCTACCCATACAAAA 1988 >seq2087 Length=1720 Score = 89.7 bits (98), Expect = 1e-13 Identities = 235/350 (67%), Gaps = 18/350 (5%) Strand=Plus/Plus Query 7149 ACTA-ATGAAGCAGTAGAATCCTTTCCGATACCTACCACTCTTCAATT----CACTGTCT 7203 |||| ||||| || ||| ||||||||||||| || || |||||| ||| || Sbjct 745 ACTATATGAAAGTGTCGAAACCTTTCCGATACCGCCC-CTTATCAATTGGATCACC--CT 801 Query 7204 TTATCTATTACCACAAATCCATATTTATT---CCAACATGCCGAGCATAAATCTCTGAAT 7260 | || | || ||||| ||||||||||| |||||| | | | ||||| | || Sbjct 802 TGCTC-ACAACAACAAAACCATATTTATTTTTCCAACACGT--ACTACAAATCGTTAAAA 858 Query 7261 GAGTTGT---ATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATT 7317 | || | ||| ||| || | |||||||||| || |||||| ||| ||||||| Sbjct 859 -ACTTCTTAAATGACATATCACCGATAACATGATCATTGTATATATGCCTCACATTCATT 917 Query 7318 TCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATT 7377 ||||||| || | || | | ||||||||||| | || | || ||||| ||| Sbjct 918 TCATCTTTTTTAAATATTACTATCATATTTGCATTATCACGTATTAAATGTTTGGGAATT 977 Query 7378 CGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAA 7437 ||||| ||||||| | ||| |||| |||| | ||| |||| |||||| || || Sbjct 978 ATCGTATACGTTTGACTTAAATAAAAGCAATCAATGTGCTTATGTCTACCCATACAAAAG 1037 Query 7438 AAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAATATCAT 7487 || | | || || ||||| || || ||||| || |||||||| Sbjct 1038 TAATTTCTTATAGTATTTTGTTTGTCGCATATTACATCATCGAATATCAT 1087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97946394691334