Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14689 105 8e-18 >seq14689 Length=1457 Score = 105 bits (116), Expect = 8e-18 Identities = 196/282 (70%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 12789 TCGAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCG 12848 ||||| |||||||||||||| | ||| || || | || ||||| || ||||| || || Sbjct 760 TCGAAACCATCCATCTCAGTAAGGAGCTGGTTCAGAGTCTGTTCGCGCTCATCGTTTCCG 819 Query 12849 GGCATACCACCCGCACTG---CGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACG 12905 | | ||| | | || | |||| |||||||| ||| ||||| || ||||| || ||| Sbjct 820 --CCTGCCATCTG-ACCGTCACGTTTCTTACCGATGGCATCAATCTCATCAATAAACACG 876 Query 12906 ATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACA 12965 |||||||| ||||| ||| || ||||| || || || || ||||| | Sbjct 877 ATACACGGAGCTTTTTCTTTGGCCTGTTTAAAGAGGTCACGAACCTTCGATGCACCCATG 936 Query 12966 CCCACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTC 13024 || |||||||| |||||||| | | ||| |||| | || || || ||||||||||| Sbjct 937 CCGACAAACATTTCCACAAATTCAGAACCGG-ACATGGAGAAAAACGGCACGTTGGATTC 995 Query 13025 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 || || | || || || | |||||| || || || || Sbjct 996 TCCGGCTACCGCCTTTGCCAGCATGGTCTTACCTGTTCCGGG 1037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613322603352360