Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq14689 98.7 1e-15 seq19840 95.1 1e-14 >seq14689 Length=1457 Score = 98.7 bits (108), Expect = 1e-15 Identities = 100/127 (79%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAG 11649 |||||||| ||||| || || || |||||||| | |||||||| ||||||||||| Sbjct 760 TCGAAACCATCCATCTCAGTAAGGAGCTGGTTCAGAGTCTGTTCGCGCTCATCGTT--TC 817 Query 11650 GGCATACCACCTG-CCG-AACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 || | ||| ||| ||| ||| |||||||||| || ||||||||||| || || |||| Sbjct 818 CGCCTGCCATCTGACCGTCACGTTTCTTACCGATGGCATCAATCTCATCAATAAACACGA 877 Query 11708 TACACGG 11714 ||||||| Sbjct 878 TACACGG 884 >seq19840 Length=86373 Score = 95.1 bits (104), Expect = 1e-14 Identities = 271/408 (66%), Gaps = 8/408 (2%) Strand=Plus/Plus Query 167357 AACCCGTACCAATACCTTCAGTACCGTTTACCAAAACCATCGGTAGAGTTGGCATGTAAA 167416 |||| || || ||||| |||| || || ||||| |||||||||| | |||| || || Sbjct 57601 AACCGGTTCCTATACCATCAGCTCCATTAACCAATACCATCGGTATAATTGGAATATACC 57660 Query 167417 AGTCGGGTTCAATGGAACGACCATCATCATCCAAGTA-GTTGAGAATGGCATCATCTTTG 167475 | | |||||| || |||| ||||| | ||| ||| | || || |||||| Sbjct 57661 ATTGGGGTTCTATCTTTTGACCGTCATCCACTTCGTACGTTAACAACGG-ATCATCGGCA 57719 Query 167476 GGATCGAAGAGCTTTCGAGCCTCCTTGGTAAGCTTCGTAAAGATGTACCTCGTCTGAGAC 167535 |||| || | || | | || || | ||||| ||||| | | || Sbjct 57720 GGATGAAATATAAGACGTGATAACGGGGACAGTATAGTAAAAATGTAACGAGCACTAGCA 57779 Query 167536 GCATCCTTGCCACCCATGAGGCGTGTACCAAATTGACCACATGGCTCGAGAAGATTGATG 167595 ||| ||||| || | | ||| ||||||||||| || | |||||| | ||||| || Sbjct 57780 CTATCTTTGCCGCCAGTTAAGCGGGTACCAAATTGGCCTCTTGGCTCCAACAGATTTATA 57839 Query 167596 TTATTCGACCCCGTATAATCGTTGGCCAACTTGACGATCGT-TTCAGCGAGGGAAACTTC 167654 |||||||| ||| ||||| | ||||| ||||| || || | || | || ||||| Sbjct 57840 TTATTCGAGCCCACATAATTTTGTGCCAAATTGACAATGGTCATTTGC-AAAGACACTTC 57898 Query 167655 GCCGTGGTGGTAAGCACTCTTTTCAGCCACATATGCTGCCAACTGTGCAACCTTCA--TC 167712 || || |||||||| | |||| ||||| || | | ||||| ||||| |||| || Sbjct 57899 ACCATGATGGTAAGCGGACATTTCCGCCACGGATCCAGATAACTGCGCAACTTTCACTTC 57958 Query 167713 TCATCTTTGAGATTCTTTTGGAAACATGAATACATAACCTTGCGTTGA 167760 || | || | | | ||| |||||||| | || ||||| || ||| Sbjct 57959 TCGT-TTATCGTTACGTTT-GAAACATGTGAATATTACCTTACGCTGA 58004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588798784483800