Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq16676 120 4e-22 >seq16676 Length=77057 Score = 120 bits (132), Expect = 4e-22 Identities = 342/514 (67%), Gaps = 10/514 (2%) Strand=Plus/Minus Query 159271 TGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAG 159330 ||||| |||||||| | |||| ||||| || ||||| || | || | || || || Sbjct 32235 TGTGAAATCACAGGTTATGATAAAATATCGTTTCAACCCAATTCCGGTGCTCAAGGCGAA 32176 Query 159331 TATGCAGGACTGTTAGCAATCCA-AGCATACCATCAAGGATCAGGA-GATGATAAAAGAA 159388 ||||| || || ||| || | ||| |||||| | | | | | || | | ||| Sbjct 32175 TATGCGGGCCTACGAGCTATACGTAGC-TACCATGA-GCACCGTAAAGAAGGGCACCGAA 32118 Query 159389 ATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAG 159448 |||| ||||| || || || || ||||| || |||||||| || || ||||| | Sbjct 32117 ATGTTTGTTTAATTCCCATTTCTGCGCATGGTACGAATCCTGCTTCTGCTCAAATGGCCG 32058 Query 159449 GGATGAAAGTTGTAGGTGTCAAGTGTGATGA-TGATGGCAACATAGACATCAAAGATCTA 159507 | |||||||||| | | | | || | | |||||| | ||||||||| | |||| Sbjct 32057 GCATGAAAGTTGAACCTAT-ACGTATACTTTCTGATGGAAGCATAGACATGGCACATCTG 31999 Query 159508 GAGAAGAAAGCAATCATGAATA--CATTTGAACTGTCATGTATTATGATTACATATCCAT 159565 | |||||| || |||| | || | | || |||||| | ||| |||||||||| | Sbjct 31998 CGCGATAAAGCA-TC-TGAACATGCAAGTAATCTTTCATGTGTAATGGTTACATATCCCT 31941 Query 159566 CTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATG 159625 | || || || || ||| | || | | | || || | || | ||| ||| Sbjct 31940 CAACTATGGGAGTTTTCGAAGAGACTATTACAGACATTTGCGACCTTATACATCGCCATG 31881 Query 159626 GTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCAT 159685 | || || || ||||| ||||| || ||| | || || || || ||| || || Sbjct 31880 GAGGACAAGTGTATCTGGATGGCGCCAATATGAACGCGCAAGTGGGTTTATGTCGTCCTG 31821 Query 159686 GTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATG 159745 | || ||||| ||||| | |||| |||| || ||||||||||| || ||||| || | Sbjct 31820 GAGATTATGGAAGTGATGTTTCTCATTTAAATTTGCATAAGACATTTTGCATTCCTCACG 31761 Query 159746 GAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | ||||| || || ||| | || |||||||| || Sbjct 31760 GCGGTGGCGGACCGGGCATGGGACCTATTGGAGT 31727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587874262744560