Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4550 89.7 3e-13 >seq4550 Length=29190 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 |||||||| || | ||| ||||||||||||||| ||||| || || | || ||| Sbjct 5271 AAAACCAAATGGAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATTT 5212 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 |||| |||||| || ||||| || | || || || ||| | || || || || || || Sbjct 5211 TCCAACTGTTTGCCAGCAAAGATCAAACGCTGTTGATCTGGTGGGACTCCTTCTTTATCT 5152 Query 34890 CTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||| || ||| || || || || | || | |||||| || | ||| || | Sbjct 5151 TGAATTTTAGTTTTAAC--ATTCTCAATAGTATCGGATGGCTCAACCTCCAAGGTGATAG 5094 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| || || | |||||||| ||||||||||| || Sbjct 5093 TTTTCCCAGTCAATGTCTTCACGAAGATCTGCATTTT 5057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324538363762488