Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq16676 125 8e-24 >seq16676 Length=77057 Score = 125 bits (138), Expect = 8e-24 Identities = 343/514 (67%), Gaps = 10/514 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||| || || ||||| || || ||||| || ||||||||||| Sbjct 31727 ACTCCAATAGGTCCCATGCCCGGTCCGCCACCGCCGTGAGGAATGCAAAATGTCTTATGC 31786 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 ||||||| |||| | ||||| ||||| || | || || ||| || || || Sbjct 31787 AAATTTAAATGAGAAACATCACTTCCATAATCTCCAGGACGACATAAACCCACTTGCGCG 31846 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| || ||||| ||||| || || || |||| | ||| | | | || || Sbjct 31847 TTCATATTGGCGCCATCCAGATACACTTGTCCTCCATGGCGATGTATAAGGTCGCAAATG 31906 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | | || | ||| || || || ||| || |||||||||| ||| | |||||| Sbjct 31907 TCTGTAATAGTCTCTTCGAAAACTCCCATAGTTGAGGGATATGTAACCATTACACATGAA 31966 Query 138423 AGTTCAAATG--TATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCAT 138480 || | | || | |||| || |||||| | |||| | ||||||||| | |||| Sbjct 31967 AGATTACTTGCATGTTCA-GA-TGCTTTATCGCGCAGATGTGCCATGTCTATGCTTCCAT 32024 Query 138481 CA-TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 || | | || | | | | |||||||||| || ||||| ||| ||||||||| Sbjct 32025 CAGAAAGTATACGT-ATAGGTTCAACTTTCATGCCGGCCATTTGAGCAGAAGCAGGATTC 32083 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCTGATCCTTG 138598 || ||||| || || || || | ||| ||||||| | | || | | | | | Sbjct 32084 GTACCATGCGCAGAAATGGGAATTAAACAAACATTTCGGTGCCCTTCTTTACGGTGC-TC 32142 Query 138599 ATGATATGCT-TGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTT 138657 ||| || ||| | || ||| || || ||||| || || || | || | || |||| Sbjct 32143 ATGGTA-GCTACGTATAGCTCGTAGGCCCGCATATTCGCCTTGAGCACCGGAATTGGGTT 32201 Query 138658 GTAATGATATAGAATCAAAACCTGTGATATCACA 138691 | || ||||| |||| |||||||||| ||||| Sbjct 32202 GAAACGATATTTTATCATAACCTGTGATTTCACA 32235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578824186618920