Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq9715 89.7 2e-13 >seq9715 Length=1611 Score = 89.7 bits (98), Expect = 2e-13 Identities = 337/522 (65%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 66220 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTAC 66279 |||||| || || | ||||| | ||| || || ||||| | || || || | || Sbjct 743 CAGAAGCGTGGCGGAATCGCCGGTTTCATTGATGCAGAGCATGCGCTTGATCCGGTCTAT 684 Query 66280 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC--AGCCGGACACTGGCG 66337 || ||| ||||||| || ||||||| || | | ||| ||||||| | || | Sbjct 683 GCGAAGAATATCGGTGTTGATATCGACAATCT--TTATATTTCCCAGCCGGATAACGGTG 626 Query 66338 AGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCG 66397 ||||||| || |||||| ||| | || || || | | || ||||| ||| Sbjct 625 AGCAGGCACTTGAGATCACTGAGACGATGGTACGTTCCGGTGCGGTGGATATCGTGATCG 566 Query 66398 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 66457 |||||||||| || || || || ||| || ||| | || ||||| || || ||||||| Sbjct 565 TTGACTCTGTTGCAGCACTTGTCCCGAAGGCAGAGATTGAGGGCGATATGGGAGACAGTC 506 Query 66458 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCAC--CGGCACCAT 66515 | || || || || ||| | || ||||| ||||| | || || || || ||||| || Sbjct 505 ATGTAGGTCTTCATGCGAGACTGATGTCTCAGGCACTTCGTAAACTTACTGCGGCA--AT 448 Query 66516 CTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCG--GCAAC 66573 | | | ||||| || ||| |||||||| | || || ||| | | | | Sbjct 447 CAGCCGTTCCAACTGTGTGGTAATCTTTATCAACCAGCTTCGTGAAAAGGTTGGTGTTAT 388 Query 66574 GTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCA 66633 || | || ||| ||||| || || || ||| || ||| |||||| || || Sbjct 387 GTTCGGTA--ATCCG---GAGACTACGACCGGTGGACGTGCCCTGAAGTTCTATGCTTCT 333 Query 66634 GTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAAC 66693 || || | |||||| | | | | || |||| | |||| ||| || |||||| Sbjct 332 GTACGTCTTGATGTCAGAAGGACAGAGACTTTGAAGCAGGGCGGCGAGATGGTTGGCAAC 273 Query 66694 CGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCG 66735 | ||| |||||||| |||||||| | || |||||| Sbjct 272 CATGTAAAGGTTAAAGTCGTTAAGAACAAAGTTGCTCCGCCG 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242664789677505