Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1643 246 1e-59 >seq1643 Length=3760 Score = 246 bits (272), Expect = 1e-59 Identities = 307/421 (73%), Gaps = 0/421 (0%) Strand=Plus/Plus Query 188777 TTGGCCCTACTGGTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATG 188836 |||| || || ||||| ||||| || || | || ||||| | ||| | | | | ||| Sbjct 1683 TTGGTCCCACCGGTTCTGGTAAGACTTTGCTAGCCAAAACACTTGCTAAAGTTTCAGATG 1742 Query 188837 TACCTCTAGCTATCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATG 188896 | || | ||||| |||||||||| ||||||| || || |||||||| ||||| |||| Sbjct 1743 TGCCATTTGCTATGGCTGATGCAACAACTTTAACTGAGGCAGGTTATGTGGGTGATGATG 1802 Query 188897 TGGAAAACGTATTGCTTCGTTTAATCCAAGCAGCTGATTACGATATCGAATTAGCGGAAC 188956 | |||| ||| ||| |||||| | ||||| || |||| || | | | ||| | | Sbjct 1803 TAGAAAGCGTGTTGTCGCGTTTATTACAAGCTGCAAATTATGACGTTGCAAAAGCACAGC 1862 Query 188957 GTGGAATTGTATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCA 189016 |||| || || | ||| |||||| |||| || || | |||||||| |||||||| || | Sbjct 1863 GTGGTATAGTGTTTATAGATGAAATAGACAAGATCACAAGAAAATCTGAAAGCACTTCAA 1922 Query 189017 TTACCCGAGATGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTA 189076 | ||||| || || || || |||||||| ||||||||| | | || || || || |||| Sbjct 1923 TAACCCGTGACGTTTCAGGTGAAGGAGTCCAGCAAGCTCTGCTTAAGATTATGGAGGGTA 1982 Query 189077 CAGTTGCGAAAGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAA 189136 ||||||| | ||||| || ||||| || || |||||||| || ||||| | | || Sbjct 1983 CAGTTGCTTATGTTCCGCCACAAGGAGGGCGAAAACACCCACAACAAGAGTTTATACAAG 2042 Query 189137 TAGATACAACTAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTA 189196 | ||||| | ||| || |||||||| ||| ||||| ||||| || || || || |||| Sbjct 2043 TGGATACTAGTAACATACTGTTTATTTGTGGAGGAGCTTTTGAAGGCCTCGATAAAATTA 2102 Query 189197 T 189197 | Sbjct 2103 T 2103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591419439411008