Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020
14-03-12] 24,071 sequences; 363,107,242 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq14689 93.3 5e-14
seq9454 93.3 5e-14
>seq14689
Length=1457
Score = 93.3 bits (102), Expect = 5e-14
Identities = 193/282 (68%), Gaps = 8/282 (3%)
Strand=Plus/Plus
Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CG 9668
|| |||||||||||||| || | || ||||| | ||| ||||| || ||||| || ||
Sbjct 760 TCGAAACCATCCATCTCAGTAAGGAGCTGGTTCAGAGTCTGTTCGCGCTCATCGTTTCCG 819
Query 9669 C-TGGCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 9727
| || ||| ||| ||| ||| ||| || | |||||||||||||||||| || |||
Sbjct 820 CCTGCCATCTGACCGTCAC---GTTTCTTACCGATGGCATCAATCTCATCAATAAACACG 876
Query 9728 ATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACA 9787
|| || || ||||| || || |||||| || || || | || ||||
Sbjct 877 ATACACGGAGCTTTTTCTTTGGCCTGTTTAAAGAGGTCACGAACCTTCGATGCACCCATG 936
Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTC 9846
|| |||||||| |||||||| | | ||| |||| | || || || || || |||||
Sbjct 937 CCGACAAACATTTCCACAAATTCAGAACCGG-ACATGGAGAAAAACGGCACGTTGGATTC 995
Query 9847 ACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888
|| || | || || || | |||||||| || || ||
Sbjct 996 TCCGGCTACCGCCTTTGCCAGCATGGTCTTACCTGTTCCGGG 1037
>seq9454
Length=16677
Score = 93.3 bits (102), Expect = 5e-14
Identities = 346/529 (65%), Gaps = 20/529 (4%)
Strand=Plus/Plus
Query 94440 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGA 94499
|||||||||||||||||| || ||||| || || ||||||||||||| ||| |||
Sbjct 13021 TTGGACTGCTGAAGAGGTTGACCTCTCTAAAGACATGGACGATTGGAATCGGTTAAGTGA 13080
Query 94500 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATTGT 94559
||| | | || || | | | |||| || ||||| | ||||||||| |||||
Sbjct 13081 CGGCGAACGGCATTTTATTTCACATGTTTTGGCTTTTTTTGCGGCATCCGATGGTATTGT 13140
Query 94560 TTTTGAGAATATCAAT--AACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCC 94617
| ||||||| | | | ||| | ||| | | ||||| ||| ||||||| | | |
Sbjct 13141 TAATGAGAAT-TTAGTGGAACGA-TTTTCCCAAGAGGTTCAAATAACTGAAGCTCGTTGC 13198
Query 94618 TTCTATGCGTATC--AGTGTCATAATGAAATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|| || | | || | || ||| |||| |||||| ||| | || ||| ||| |
Sbjct 13199 TTTTACGGTTTTCAAATTGCCAT--GGAAAATGTGCATTCGGAAATGTATAGTCTACTTA 13256
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAA---GAAGCAGCTCTTTGAAGCCATCCAAA 94732
| || | ||||| | ||||| |||| ||| | |||||| | ||||| | |
Sbjct 13257 TCGAAACATATATCATGGATG--AGAAAGAACGTGAA-TATCTCTTTAATGCCATTGAGA 13313
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTAT-GAAGTGGTTTGATACAAAGTCG 94791
|| | || | || | ||||| || || |||||| | | | | | | || | | |||
Sbjct 13314 CAATGCCATTGGTTAAGAAGAAGGCCGAATGGGCTCTAGCATGGATATCAT-CGCATTCG 13372
Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851
| |||| ||||| || | || || || ||| || ||||| ||||| |||
Sbjct 13373 GCTAATTTTGGCGAGCGTATCATAGCTTTCGCTGCTGTCGAAGGTATTTTCTTTAGTGGC 13432
Query 94852 TCCTT--CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
||| || || |||| |||||| ||||| || || | ||||||||| | ||||
Sbjct 13433 AGCTTCGCTTCGATATT--TTGGCTAAAGAAACGTGGAATAATGCCAGGTTTAACATTCT 13490
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGT 94958
| || || | || || ||||| || || | ||| || ||||||||
Sbjct 13491 CTAATGAAATGATATCACGTGATGAAGGCTTGCACTGTGAATTTGCGGT 13539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583085304116040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |