Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq9715 89.7 2e-13 >seq9715 Length=1611 Score = 89.7 bits (98), Expect = 2e-13 Identities = 199/296 (67%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 65886 CAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTAC 65945 |||||| || || | ||||| | ||| || || ||||| | || || || | || Sbjct 743 CAGAAGCGTGGCGGAATCGCCGGTTTCATTGATGCAGAGCATGCGCTTGATCCGGTCTAT 684 Query 65946 GCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTC--AGCCGGACACTGGCG 66003 || ||| ||||||| || ||||||| || | | ||| ||||||| | || | Sbjct 683 GCGAAGAATATCGGTGTTGATATCGACAATCT--TTATATTTCCCAGCCGGATAACGGTG 626 Query 66004 AGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCG 66063 ||||||| || |||||| ||| | || || || | | || ||||| ||| Sbjct 625 AGCAGGCACTTGAGATCACTGAGACGATGGTACGTTCCGGTGCGGTGGATATCGTGATCG 566 Query 66064 TTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTC 66123 |||||||||| || || || || ||| || ||| | || ||||| || || ||||||| Sbjct 565 TTGACTCTGTTGCAGCACTTGTCCCGAAGGCAGAGATTGAGGGCGATATGGGAGACAGTC 506 Query 66124 ACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCAC--CGGCA 66177 | || || || || ||| | || ||||| ||||| | || || || || ||||| Sbjct 505 ATGTAGGTCTTCATGCGAGACTGATGTCTCAGGCACTTCGTAAACTTACTGCGGCA 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242351281676867