Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq9454 298 5e-76 >seq9454 Length=16677 Score = 298 bits (330), Expect = 5e-76 Identities = 503/716 (70%), Gaps = 18/716 (3%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 ||||| || || || ||| |||||||||| | | ||| ||| | ||| || |||||| Sbjct 13713 AGCAAACGATCGGCAACATATTCTATATATTTACACATACTTTCACTGTTCATGCCAATT 13654 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 || || |||| || | |||||||||||||| ||| || ||||||| || || ||| Sbjct 13653 AAGTCGACTGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTTACGGCATCAGTTATT 13594 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || || || |||||| ||||| | || ||| | | ||||| || |||| Sbjct 13593 ATTTCCAAAATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACATTAGTACCGCA 13534 Query 4554 AAATCACAATGCAAACCTTCGTCTC-TGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 || ||||| ||||| ||||| || | || || ||| ||| ||||| || ||||| || || Sbjct 13533 AATTCACAGTGCAAGCCTTCATCACGTGATA-TCATTTCATTAGAGAATGTTAAACCTGG 13475 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||||| || | || || ||||||||||| | || || ||| |||||| || || Sbjct 13474 CATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTGCCACTAAAGAAAATACC 13415 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCC 4731 ||| || || || || |||| | || || || ||| | | | || ||| Sbjct 13414 TTCGACAGCAGCGAAAGCTATGATACGCTCGCCAAAATTAGCCGAATGCGATGATA-TCC 13356 Query 4732 ATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATA 4791 || || ||||| | || || |||||||| | || ||||| | || || ||||| | Sbjct 13355 ATGCTAGAGCCCATTCGGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAAGA 13296 Query 4792 ---ATTTACTTT-TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATT 4847 ||| || || |||| || | ||| |||| || || || ||||| ||||||||| Sbjct 13295 GATATTCACGTTCTTTCTCATC---CATGA-TATATGTTTCGATAAGTAGACTATACATT 13240 Query 4848 TCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACT 4907 || ||||| | |||||| || ||||| ||||| ||||||||||| | |||||| |||| | Sbjct 13239 TCCGAATGCACATTTTCCATGGCAATTTGAAAACCGTAAAAGCAACGAGCTTCAGTTATT 13180 Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967 ||||| || | |||||| ||| ||||| || || || || ||||| || || ||| Sbjct 13179 TGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCA 13120 Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTT---CGTCAGGCTTAAGTTTTTTCCAG 5024 ||||| ||||||||||| || ||||| | | ||| ||||| ||||| ||||| Sbjct 13119 AAAAAAGCCAAAACATGTGAAATAAAATGCCGTTCGCCGTCA--CTTAA-CCGATTCCAA 13063 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | | || ||||||| | ||||| |||||| |||||||||| || |||||||| Sbjct 13062 TCGTCCATGTCTTTAGAGAGGTCAACCTCTTCAGCAGTCCAAAAAGAGGCTTCCGC 13007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426924318460643