Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq9454 273 2e-68 seq21866 95.1 1e-14 seq6733 95.1 1e-14 seq864 95.1 1e-14 >seq9454 Length=16677 Score = 273 bits (302), Expect = 2e-68 Identities = 476/691 (69%), Gaps = 6/691 (1%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || ||| |||| ||||||| |||||| ||| ||| || || |||| | || Sbjct 13705 ATCGGCAACATATTCTATATATTTACACATACTTTCACTGTTCATGCCAATTAAGTCGAC 13646 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 ||| | || || || || ||||||||| || ||||| | ||||||| | Sbjct 13645 TGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTTACGGCATCAGTTATTATTTCCAA 13586 Query 23463 AATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACA 23522 ||| ||||| ||| ||| | | |||||| ||||||| || ||||| ||||| Sbjct 13585 AATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACATTAGTACCGCAAATTCACA 13526 Query 23523 ATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCC 23582 || | ||||||||| | |||| ||||||||| |||||||| |||||||||| ||| Sbjct 13525 GTGCAAGCCTTCATCACGTGATATCATTTCATTAGAGAATGTTAAACCTGGCATTATTCC 13466 Query 23583 TCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGC 23642 ||||| || | ||||||||| | ||| || || |||||||||||| || ||||| Sbjct 13465 ACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTGCCACTAAAGAAAATACCTTCGACAGC 13406 Query 23643 CGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGT 23702 || || || | | ||| ||||| | || || || |||||| | | Sbjct 13405 AGCGAAAGCTATGATACGCTCGCCAAAATTAGCCGAATGCGATGATATCCATGCTAGAGC 13346 Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762 ||| | |||||| || || | ||||| ||||| || || |||||| | Sbjct 13345 CCATTCGGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAAGAGATATTCACG 13286 Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||||| | ||| | |||||||| || || |||| |||||||||||| ||||| | ||| Sbjct 13285 TTCTTTCTCATCCATGATATATGTTTCGATAAGTAGACTATACATTTCCGAATGCACATT 13226 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 ||| || ||||| ||||| || ||||| || | |||||||| | |||||| || | | Sbjct 13225 TTCCATGGCAATTTGAAAACCGTAAAAGCAACGAGCTTCAGTTATTTGAACCTCTTGGGA 13166 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 ||||| || ||||||| || |||||||||||||| || ||||| ||||| | ||| Sbjct 13165 AAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGCCAAAAC 13106 Query 23943 ATATTTTATAAAATGTCTTT---CATCAGTTGATAATTTTTTCCAATCATTAATATCTTT 23999 || | |||||||| | || | ||| | ||| |||||||| | || ||||| Sbjct 13105 ATGTGAAATAAAATGCCGTTCGCCGTCACT---TAACCGATTCCAATCGTCCATGTCTTT 13049 Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || | ||||| || ||| | ||||||||| Sbjct 13048 AGAGAGGTCAACCTCTTCAGCAGTCCAAAAA 13018 >seq21866 Length=17884 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 6568 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATGTGGGAAGTGC 6509 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||| ||| | || | |||||||| ||||| ||||| Sbjct 6508 AAATATGGATTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 6467 >seq6733 Length=17533 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 10966 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATGTGGGAAGTGC 11025 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||| ||| | || | |||||||| ||||| ||||| Sbjct 11026 AAATATGGATTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 11067 >seq864 Length=64046 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 139428 AGGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGC 139487 ||| ||| ||||||||||||| ||| |||| |||||||| ||| | ||| | |||||||| Sbjct 5944 AGGAGTCTTACATACAAAATTATGGGTTGTAGATAATAAGCATTTTTATGTGGGAAGTGC 6003 Query 139488 TAACATGGACTGGCGATCACTAACTCAAGTAAAAGAATTAGG 139529 || ||||| ||| | || | |||||||| ||||| ||||| Sbjct 6004 AAATATGGATTGGAGGTCTTTGACTCAAGTCAAAGAGTTAGG 6045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521331090779400