Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20morsitans_20morsitans_20[genbank_20GCA_5F001077435.1_2020 14-03-12] 24,071 sequences; 363,107,242 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq20037 107 3e-18 >seq20037 Length=63172 Score = 107 bits (118), Expect = 3e-18 Identities = 197/286 (69%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 156165 AACAATCGTCTGACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCG 156224 ||||| ||||| | |||||||| || || || |||||||| | ||||| || ||| || Sbjct 48603 AACAACCGTCTTATATTAGCTTCGGACTCGCCAACATATTTATCTAATACTTGAGGGCCA 48662 Query 156225 TTAACTATTTTGACGGGTCGTGA---TTTAAAAGCTTGAGCGATACAGCGAGCCATTAAT 156281 || || ||||| || || || || || | ||| | || ||||||||| || Sbjct 48663 TTTACAATTTTT--GGCTCACGAGCATTCAACATATTGC-CTATTTGGCGAGCCATCAAG 48719 Query 156282 GTTTTACCGCACCCAGGAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAAT 156341 |||||||| |||||||| || || | ||| | ||||| | ||| || ||||| | Sbjct 48720 GTTTTACCAGTACCAGGAGGACCATACAGCAAAATACCTTTGACATGCTTGCAACCCAGC 48779 Query 156342 TTTTCAGTTATTTCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAGAA 156401 | |||| | ||| |||| ||| |||||||| || | || || || | Sbjct 48780 TGTTCAACCACTTCGGGGGGAAAAACTCTTGAAGCAAAAGCACGACGGAAGATAGCATTG 48839 Query 156402 AATTCTTTATCCAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 |||||||||||||| || || | |||||||| |||||| ||||| Sbjct 48840 AATTCTTTATCCAAGCCGCCGATACCCATTTTGCCAAAATCCCAAT 48885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666874485410760