Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= AC_000013.1 Length=45063 Score E Sequences producing significant alignments: (Bits) Value seq40 86.0 2e-12 >seq40 Length=1701721 Score = 86.0 bits (94), Expect = 2e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 1030 CAATTCCCCCGAGGCGTGTACGGGCGCATAGCCCCTCGTTCGGGCTTGGCCGTAAAGTTT 1089 ||| | ||| | ||| ||||| ||| |||| || || || |||||||| ||| | Sbjct 133867 CAAGTACCCAGTGGCTCTTACGGTCGCGTAGCACCACGATCCGGCTTGGCTTGGAAGAAT 133808 Query 1090 TTTATCGATGTGGGAGCCGGTGTTATCGATAGCGATTACCGGGGCATCGTTAGCGTCCTC 1149 || |||||||||||||| ||||| || ||| |||||||| |||| | | || || Sbjct 133807 TTCATCGATGTGGGAGCTGGTGTGATTGATGAAGATTACCGAGGCAATTTGGGTGTTCTT 133748 Query 1150 CTTTTCAATTTTTCGGACCACAATTTCAACGTCCGTCGGGGCGATCGCATAGCTCAGTTA 1209 ||||||||| ||| ||| |||| | || || || || ||||| || || || Sbjct 133747 CTTTTCAATCATTCCGACGTTGATTTTGATGTTAAGCGTGGTGACCGCATTGCCCAATTG 133688 Query 1210 ATTTTGGAGCGT 1221 |||| |||||| Sbjct 133687 ATTTGCGAGCGT 133676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144077046900300