Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_000929.1
Length=36717
Score E
Sequences producing significant alignments: (Bits) Value
seq367 174 4e-39
>seq367
Length=84945
Score = 174 bits (192), Expect = 4e-39
Identities = 292/416 (70%), Gaps = 6/416 (1%)
Strand=Plus/Plus
Query 35098 ATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCTT 35157
|| |||||| | ||||| |||| |||||| || || || || | || ||||| | |||
Sbjct 11719 ATAGGCTATATGAGGGTGTCAAAAAATGAACAAAACACCGATTTACAGCGAAAATCACTT 11778
Query 35158 GTTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAG-GA-CAGACC 35215
||||| || ||||| || || ||||| |||||| | ||||||| || || ||||
Sbjct 11779 ATTTGTACAAATTGTGAGCAGATTTTTGAGGATAAAATCAGCGGAAAAACAGATCAGA-- 11836
Query 35216 GACCGGGATTAAAACGCGCTTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCTGGA 35275
|||| ||||||||||||| |||| || || |||||||| | | |||||||
Sbjct 11837 GACCCAGATTAAAACGCGCGCTAAATGCACTGAAATCGGGTGACACCTTAATCGTCTGGA 11896
Query 35276 AACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATTTCTCTCGTAGGGGAATTACGAG 35335
| |||||| | || || || ||||| |||||||||||| || | || || | ||
Sbjct 11897 AGCTGGATAGACTGGGTCGCAGCATTAAACATTTGATTACTTTAATATCCAAACTGGAAG 11956
Query 35336 AGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATTGATACGTC-ATCTCCAATGGGG 35394
| ||| ||| |||||| ||| | || || |||||||| || | ||| | ||
Sbjct 11957 ATGAAGGTATTCATTTTCATAGTTTGACGGATGCCATTGATACCTCTACGTCCGCT-GGC 12015
Query 35395 CGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATTATCGAG 35454
||||||||||| || || ||| |||| |||| ||||||| || ||||| ||| | |||
Sbjct 12016 CGTTTTTTCTTTCATGTGATGAGTGCGTTGGCGCAAATGGAGCGGGAACTCATTGTTGAG 12075
Query 35455 CGAACGATGGCTGGACTTGCTGCCGCCAGAAATAAAGGCCGTATTGGTGGGCGACC 35510
|| || | ||| || | || || || |||| | || ||||| || || ||||
Sbjct 12076 CGTACTAAGGCAGGTTTAGCCGCAGCAAGAAGCAGGGGACGTATCGGGGGTAGACC 12131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117370394297748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |