Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_000935.1 Length=36524 Score E Sequences producing significant alignments: (Bits) Value seq429 468 1e-127 seq298 178 3e-40 seq1391 158 3e-34 seq1308 125 2e-24 seq362 98.7 2e-16 >seq429 Length=112147 Score = 468 bits (518), Expect = 1e-127 Identities = 713/1002 (71%), Gaps = 65/1002 (6%) Strand=Plus/Minus Query 27326 TGGAAGTGCTCAAAAAGCTGTTTGATCTCCGCTAATACGATATCGATATTCTCACGCTTG 27385 ||| ||| ||| |||||| | | || || || | ||| ||| || | ||||||||| Sbjct 7150 TGGCAGTTCTCGAAAAGCCGCTGTATATCGGCCAGCACGGTATGGACGTCTTCACGCTTG 7091 Query 27386 CGTAAAAGTCGTTTGATCGTCTGCTTTTCAGCCTCATTGATAATCTGGCGCAATGTCTCA 27445 || | || || |||| || |||||||| || || | ||| | | |||| | || Sbjct 7090 CGCAGAATGCGCTTGAGGGTTTGCTTTTCCGCTTCGTGGATGGTTTCACGCAGGGGTTCG 7031 Query 27446 GTGATATAGTAAATGCGTCTGCACTCATCAGCCATTAACGGTATATGCTCTATTTGAAAA 27505 |||| |||||||| | | |||||| || |||| || || || |||| | || ||| Sbjct 7030 GTGACGTAGTAAATACAGCGGCACTCTTCGGCCAGCAAGGGGATGTGCTGTGCTTCAAAG 6971 Query 27506 CGCTCCGGTGGGGGTGTGCCCGTCACTTCGCGTAGCGCCAGCCACACCGCTCTAGTCCAT 27565 || ||| | || ||||| ||||| ||||| || | | || | | |||||| Sbjct 6970 GGCATCGGCGATGGGGTGCCGGTCACATCGCGCAGAGAATAGTAAACGGTATTGGTCCAT 6911 Query 27566 GACTGTTCAAACCGAAAGCCATTTGTCATACACCAGACTAAATGCGTTAGATTTCGAGT- 27624 | ||||||||| || ||||| | || || ||||| ||||| | | || || || || Sbjct 6910 GCCTGTTCAAAACGGAAGCCGTGGGTAATGCACCATACTAAGCGAGCAAGGTTACGGGTG 6851 Query 27625 --ATCCGAATGGGTAAAACGCTCTGCGGCTTTCGGTTGGGATTGGTATTTTGGTGTAAAG 27682 ||| | ||||||||||| | | |||| || ||| |||| Sbjct 6850 GTATCGGTGCGGGTAAAACGCGCAGGTGCTTCAGGCTGG----------------TAAA- 6808 Query 27683 TTAGCGGTTTGGTTAACTGTTTGCTTATCAAGGATATCCAGCACCCATTTTCTGAATTCT 27742 ||| |||| ||| | || ||| ||||| |||||||||||||| | ||| ||| Sbjct 6807 ----CGGGTTGGCCGACT--TCGCG-ATCGAGGATGTCCAGCACCCATTTGCGGAACTCT 6755 Query 27743 TTTGCTACTGGTGTACGGGAAAATATGGCGATTAAGTGTGCCCCACGTAGAGAAAAAATT 27802 || || | || || || ||| || || || | ||| || || || || || ||||| Sbjct 6754 TTGGCGATCGGCGTGTTGGCAAACATTGCTATCAGGTGCGCGCCGCGCAGGGAGAAAATG 6695 Query 27803 CTTGTTTTGTTACG-AGATTTTCCTAAGG--------TCGTCGAA----TCAA--CGAC- 27846 | | ||| | || | ||| || |||| || |||| |||| ||| Sbjct 6694 CGGATCTTGCTGCGTAAATTGTCGTAAGTCGTTGATTTCTTCGAGGTACTCAATTCGAGT 6635 Query 27847 -CTT-GGACATATGATCCGCGA----ATTCATCAGAATTT---TTGTGATAAAGATCGGT 27897 ||| || ||| |||| | |||||||| || |||| ||||| | | | Sbjct 6634 ACTTCGGTCATC----CCGCTAGTAAATTCATCACTGTTCCGATTGT-ATAAAACT-GTT 6581 Query 27898 A-ACGGATTTACTGCTGGAGTATTGTAATGCCTTAGCAAGCACGCTAGACGTAAACCAAA 27956 | ||| || | | ||| |||| | ||| ||||||||| | ||| || ||||| | Sbjct 6580 ACACGCTTTGAGTC--GGAATATTCGAGTGCTTTAGCAAGCTCAGCAGAGGTGAACCAGA 6523 Query 27957 TCTGCCCATTATGAGATATGGTTTCAAGAACAGTATTGCGGAAAACTAAAGTAGTCATAG 28016 ||||||| || || | |||||||||||||| || || ||||| | ||| || ||||||| Sbjct 6522 TCTGCCCGTTGTGGGGAATGGTTTCAAGAACGGTGTTACGGAACATTAAGGTTGTCATAG 6463 Query 28017 TAATGATTTCCTTGTTAGTTAAGGATAATCACCACCTTTGAGGTCTCAAACTCATATTGG 28076 ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 6462 TAATGATTTCCTTCTTAGTTAAGGAACATCACCACCTA-GAGGTCTCAAACTCATATTGG 6404 Query 28077 CGGTGAACTGAACAGGGTTGAGACTACCGGCTAACAAGGACCCAGCGAGCCTTTCGGCTC 28136 || || ||||||||||||||||||||||||||| |||||||| ||||||||| |||||| Sbjct 6403 TGGCGAGCTGAACAGGGTTGAGACTACCGGCTAAGAAGGACCCGGCGAGCCTTGCGGCTC 6344 Query 28137 CCCCATCCAGCCCACCATTGATTTTTGATATGGCAGCCTGACGCATaaaaaaaaCACGCT 28196 ||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||| Sbjct 6343 CCCCATCCAGCCCACCATT--ATTCTGATATGGCGGACTGACGCATAAAAAAAACACGCT 6286 Query 28197 TACTGCGTGCTATGCGCCTTGTTAGCTAATACGGGGTCTCAAACCCGACACCTGATTTTG 28256 | ||||| |||||||||| |||| ||| |||||||||||||||||||||||| |||| Sbjct 6285 CTCGGCGTGTTATGCGCCTTCTTAGATAA-CCGGGGTCTCAAACCCGACACCTGAATTTG 6227 Query 28257 CAGATGCAAATAAACTATAGCGCATGATTTCTTCTTTCGTCA 28298 ||| ||| || ||||||||||||| || ||||| ||||| Sbjct 6226 CAGGTGCGGATTGACTATAGCGCATGGGTTATTCTTCCGTCA 6185 Score = 279 bits (308), Expect = 1e-70 Identities = 483/693 (70%), Gaps = 17/693 (2%) Strand=Plus/Minus Query 30382 TCCGCCAGTTCATCTAAATCCAGACCGTAGGCGAGGGCGAATGTCAGAAATGCCGCAACG 30441 || ||||| |||| | || || ||||||||||||||||| |||| || ||||| ||| Sbjct 2676 TCGGCCAGCGCATCGAGGTCAAGGCCGTAGGCGAGGGCGAAGGTCAAGAAGGCCGCTACG 2617 Query 30442 CCTCCACCATAGCCTAAGCCGAGCTCCATCACCTTACCGATTTGCCGTTGTTCTTTGGTG 30501 || || ||||||||||| || |||||||| || || || | ||||| ||| ||||||| Sbjct 2616 CCGCCGCCATAGCCTAATCCAAGCTCCATTACTTTCCCAACTTGCCTTTGCGCTTTGGTC 2557 Query 30502 ACGTC-CTCAGGTAAAAGATTAAAAGCGCGCGCATAGGCGAGTTTATAGAGGTCATCACC 30560 | || || ||| | | | || || || ||||| || || || |||||||| || Sbjct 2556 ATTTCGCTTGGGTCGATG-TGGAACGCCTTGGCGTAGGCCAGCTTGTACAGGTCATCGCC 2498 Query 30561 TTTGCCGTTATCAAACTCGCTAAAAGCGTTGACTTTCCAGTTTTCCCCTGCCAGCCACGC 30620 | ||| || | |||| || || | | ||||| | || || ||||||||||| Sbjct 2497 GATACCGGCGTCGTAATCGCGGAATGCCTGCAGCTTCCATTCCTCGCCCGCCAGCCACGC 2438 Query 30621 CAGCATGCGGCCTTCGATATTCGACAAATCCGAGATAACCAGCTTTTTACC--CGGTGGT 30678 ||||| |||||||||||||| || || || | || ||||| ||||| ||| || Sbjct 2437 CAGCACCCGGCCTTCGATATTGCTCAGGTCGGATACTACTAGCTTCTTACCTTCGGGCGT 2378 Query 30679 GCAATAATACATCCTCTTAGCGCGGAACTGGTCAGTTGCATAATGTC--ATCACAAATCA 30736 || || || | | ||| || |||||||| || |||||| ||| | |||||| Sbjct 2377 GCGG--ATGCAGGCGCGTAGTGCAGAACTGGTGAGCGGCATAACGTCGAACGCCAAATCT 2320 Query 30737 GCTCGGCGCAACCGGCTTTTAAG-GCTTCAATCCCGTTATCAATGG-TGTTTGGGTCAAG 30794 || || | |||| || || | ||||| ||||| || || | || | Sbjct 2319 GCCACGCCCT------TTTTCAGCGCCTTTATCCCCAGGTCAATCTCTGCCTGTGACATG 2266 Query 30795 CGTGGGTCTGGGGAGATTATCTGGTTGAAAAACGCGCCCCGCCCAGCGTCCGGTGCGTGA 30854 ||| | ||||| || || || ||||||| |||||||||||||| ||||| ||||| Sbjct 2265 GATGGC-CGAGGGAGGTTGTCGGGCTGAAAAAGCCGCCCCGCCCAGCGCCCGGTACGTGA 2207 Query 30855 GGCACCACAAAATTGCTTAGTTCCTCTAAGTCGTCCATCTGCACTCACCGATTTTAACAG 30914 |||||||||||| ||||| || || | | || ||||| || || |||| | || Sbjct 2206 GGCACCACAAAACTGCTTGGTGCCGCGTAAACGGCCATCGCGGCTGACGGATTCGACCAA 2147 Query 30915 CGCTTTATATTTACTGGTGCTGGTTGTACAGGATTGCAGACGGACTGACAGCAGTTCGCG 30974 | || |||||||||||||||||||||||||| |||||||| |||| ||||||| Sbjct 2146 TTTCTCGTACTTACTGGTGCTGGTTGTACAGGATTGGAGACGGACGATCAGCCGTTCGCG 2087 Query 30975 TAAAGCCGGTGGGATATCAGGGTCATTAATGCGGCGCTGTAGCGTACTGGCCTGCATATC 31034 || || || | ||||||||| || || || |||| || ||||| ||||||||| Sbjct 2086 CAACGCTATCGGCAGATCAGGGTCGTTGATACGCCGCTTAAGTGTACTTTTCTGCATATC 2027 Query 31035 TGGTAACGTGATGCCAAATGCAGAAGCGATATG 31067 || | || ||||| || || | ||||||| Sbjct 2026 CGGCAGGGTAATGCCGAAGGCGTTAACGATATG 1994 Score = 199 bits (220), Expect = 9e-47 Identities = 206/270 (76%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 25034 TTTCCTTTTCATCGCTTCCAGTAATAAATCCTGTATTGCCCGTTTTGAATTGCGTCGTTC 25093 ||||| |||||||| || | ||| | ||||| | || ||||| | |||||| || Sbjct 10719 TTTCCGCTTCATCGCCTCTAATAAAATGTCCTGCACCTGACGCTTTGAGTCGCGTCGCTC 10660 Query 25094 CATGACCACTTCATCGAGGGTATCTTTAGCAACGATATGGTGAATAAAGACAGGGCGGTT 25153 |||||||| |||||||| |||||| | || || || |||||||| || || ||||| Sbjct 10659 CATGACCAGTTCATCGACGGTATCGGTGGCGACAATGTGGTGAATGAATACCGGGCGCGG 10600 Query 25154 ATGTCCGGCTTGTGCCTGACGAGTCGGGCCTATACGTTCGATAATTTGCTGGTACTGCTC 25213 || ||||| || ||||| || |||||||| || || |||||||| |||||||||||||| Sbjct 10599 GTGCCCGGCCTGAGCCTGTCGGGTCGGGCCGATGCGCTCGATAATCTGCTGGTACTGCTC 10540 Query 25214 TAAATCCCACCAGTGGGaaaaaaaGACCAGAATATTACCGCCGTCCTGTAAATTTAAGCC 25273 | ||||||||||||| ||||| ||||| | ||||||||||||||| | || | || Sbjct 10539 AAGGCCCCACCAGTGGGAGAAAAACACCAGGACATTACCGCCGTCCTGAAGGTTCAGCCC 10480 Query 25274 GTGTCCACAGCTTGCGGGGTGAGCAAAGAG 25303 ||| || ||| |||||||| || || || Sbjct 10479 GTGCCCGGCGCTGGCGGGGTGGGCGAACAG 10450 Score = 95.1 bits (104), Expect = 3e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 25853 CTCGCCCTGGTCAACAAACCACGCTTGACCCCATAAGTCCATCAGGCCATTAGGTGAAGG 25912 || |||||||||||| ||||||||||| ||||| | ||| || | ||| ||||| | || Sbjct 9749 CTTGCCCTGGTCAACGAACCACGCTTGTCCCCACAGGTCGATTAAGCCGTTAGGGGCGGG 9690 Query 25913 CGTACCGGTCAGATTTACCCAGCGATGAACAGATTTATGCGCTATTTTGGCAAGTGCTGC 25972 || || |||||||| |||||||| | ||| |||||||||| | || || || || || Sbjct 9689 GGTGCCTGTCAGATTGACCCAGCGGTCAACGTATTTATGCGCGACCTTCGCCAGCGCCGC 9630 Score = 91.5 bits (100), Expect = 3e-14 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 26127 AGTGCCGC-TATCCGTGCTTTGGCAGAGCCAATGATGGGTTGTACTTCAATATTACGCAG 26185 || ||||| | || |||||||| | ||| ||||||| || || | | |||||| Sbjct 9637 AGCGCCGCCTGTCGCTGCTTTGGT-GTGCCTGTGATGGGCTGCACCACGAGGCCACGCAG 9579 Query 26186 GTGGCTCCATTTAAGCGCTTCATCTGGCCAGGTGGATTGCGCTACCCGTAACGGGGCTAA 26245 || ||||||| ||||||||||| ||||||||||| || || || | ||||| | Sbjct 9578 ATGCGTCCATTTCAGCGCTTCATCAGGCCAGGTGGACGTGGCGACGCGCAGTGGGGCCAG 9519 Query 26246 CACTAATGTCGGTTTGGTTTCACTGCCTGA--TAAATAGAGATTTTCTAACGCCGTCAGT 26303 || || | || | || || ||||| || | |||| | | || | | |||| | | Sbjct 9518 TACCAAAGCCGCTCGCGTCTCGCTGCCCGATTTGAATAATG--TGTCCAGCACCGTTAAT 9461 Query 26304 GTGGCTGCCGTTTTTCCCATTCCCATTCCCGCCCAGACATTTGAGCG 26350 ||||| | ||||| ||||| ||||| |||||||||| ||| |||| Sbjct 9460 GTGGCAACGGTTTTGCCCATCCCCATGCCCGCCCAGATATTGCAGCG 9414 Score = 89.7 bits (98), Expect = 1e-13 Identities = 134/182 (74%), Gaps = 14/182 (8%) Strand=Plus/Minus Query 28123 GAGCCTTTCGGCTCCCCCATCCAGCCCACCATTGATTTTTGATATGGC-AGCCTGACGCA 28181 ||||||||||||||| ||||||||||||||||||| ||| | || || || || Sbjct 107619 GAGCCTTTCGGCTCCACCATCCAGCCCACCATTGA-----GATGTAGCTAGATTGCGACA 107565 Query 28182 TaaaaaaaaCACGCTTACTGCGTGCTATGC-GCCTTGTTAGCTAATACGG--GGTCTC-A 28237 | ||||| ||||||| | ||||| || | | | | | || | ||| || | | | Sbjct 107564 T-AAAAAGACACGCTCGCGGCGTGTCATTCTGTCGCGGTTACT--TCCGGCAGGACGCGA 107508 Query 28238 AACCCGACACCTGATTTTGCAGATGCAAATAAACTATAGCGCATGATTTCTTCTTTCGTC 28297 | |||| ||||||| |||||||||||||| ||||||||||||| | ||| |||||| Sbjct 107507 ATCCCGGCACCTGAATTTGCAGATGCAAAGCGACTATAGCGCATGGGAT-TTCCTTCGTC 107449 Query 28298 AA 28299 || Sbjct 107448 AA 107447 >seq298 Length=289783 Score = 178 bits (196), Expect = 3e-40 Identities = 333/482 (69%), Gaps = 8/482 (2%) Strand=Plus/Plus Query 3763 CAATTAG-AGTAAGACTGAGGGTAAAATGCGATGCGCAGAGATATTCAACAAGTGTTAGA 3821 ||||||| | ||| |||||||||| ||||||||||||||||| || ||| ||| Sbjct 265162 CAATTAGGACTAA---TGAGGGTAAAGCAAAATGCGCAGAGATATTCAGCAGGTGCTAGC 265218 Query 3822 GCGATGGGGAACCTGGGCCCGTGATAACAACACCGGGATAGACTGGTCGCCGATAGCGGC 3881 ||||||||| |||||| |||| ||||||| | | |||||||||||| | || || Sbjct 265219 GCGATGGGGCGTATGGGCCAGTGAAGACAACACTTGCGTTGACTGGTCGCCGGTCGCTGC 265278 Query 3882 AGGTTTTAAGGGATTGCTCCCATTACGCCCGTCTATGCGCCCTTCGTGCTCAGATGAGGA 3941 ||||| ||||| |||| ||| ||| | ||| | |||||||| || || || Sbjct 265279 CGGTTTCAAGGGGCTGCTGCCACAGCGCAGTACGTGGCGGCTGTCGTGCTCCGACGATGA 265338 Query 3942 TGGTCGGATTATCGATAATTGCGTTTCGCAATTGCAACAAGTGCGCCAGCCTGAGGAGCT 4001 ||| | | ||||| | ||||| | ||| |||| |||| ||||||||||||||||| Sbjct 265339 CGGTTTGCTCATCGACAGCTGCGTGTTGCAGCTGCAGAAAGTCCGCCAGCCTGAGGAGCT 265398 Query 4002 TAGTTTAATTATTGCGTATTACGTCAAGGGCTATTCGAAGCGGGCCATCGCTCGCCGACG 4061 | | | || ||||| |||||||| || | ||| || || || || || || ||| Sbjct 265399 TGACCTGCTCATGGCGTACTACGTCAAAGGATTTTCAAAACGAGCGATGGCGCGTAAACG 265458 Query 4062 TCGAGTGGATGAG-GGGCT-GATACGGGCAAAATTACTGATTGCAGAAGGCTTTATTGAC 4119 | | | | | || |||| || || || | || || || || ||||| || Sbjct 265459 -CAAAT-GTTCAGAAGGCTATATCCGTATGCGTTTGCAAATCGCGGAGGGATTTATCGAG 265516 Query 4120 GGGTGTTTATCGCTGCTCGCCGTGCGATTAGACATGGACCCGGAGGTTAAAATGTATTCG 4179 || || | ||| |||| | || | |||||||| || || || ||||| | || Sbjct 265517 GGCTGCCTGTCGATGCTAGATACACGGCTGGACATGGATCCAGAAGTGAAAATCTTCCCG 265576 Query 4180 CCACAAAAAAGTGGAAAAAGGATTAGTGCGGTCCGCAAAAAGTTTGTTAATGTGCTATGA 4239 | |||||||||| ||||| | |||| ||| | |||| |||| || ||||||| |||| Sbjct 265577 TCGCAAAAAAGTGAAAAAACGCTTAGCGCGCTACGCACAAAGCCTGCTAATGTGGCATGA 265636 Query 4240 GT 4241 || Sbjct 265637 GT 265638 Score = 105 bits (116), Expect = 2e-18 Identities = 221/327 (68%), Gaps = 2/327 (1%) Strand=Plus/Plus Query 2658 TTTACTGAAATTTCCTTTGCTGAAAAAGATGATGATCTGGCACGTAAGATGCGGGGCTGT 2717 ||||| ||||| ||| |||| |||| ||||| || || | || || |||||||| | Sbjct 264288 TTTACCGAAATCTCCCTTGCGGAAAGGGATGAGGACCTTTCGCGAAAAATGCGGGGGCGC 264347 Query 2718 CTGGTGGCAGAAATTAGCGAATTACGCGGACTTAATACCAAAGAACTGGAATCTATCAAA 2777 |||| | ||||| |||| | || || || || |||| || | || || ||||| Sbjct 264348 TTGGTTGGGGAAATCTCCGAACTGCGTGGCCTGAACTCCAAGGAGATTGAGTCCATCAAG 264407 Query 2778 GCCTTTGTCACTCGGACACATGAAAAGTGGATCCCCAAGTTTAAAGAATTCGCCACTCAA 2837 || || | ||||| || |||||| ||| | ||||| | ||||||||||| || Sbjct 264408 GCGTTCATTACTCGTACGCATGAAGTCTGGGTGCCCAAATACCGTGAATTCGCCACACAG 264467 Query 2838 TTTCCCAGACGCTCATTGAGTATTGGTACTACGAATGAAGATGAATTTTTAGGTGATAAA 2897 || | | || ||| | || ||||| ||| | || || ||| | | || || Sbjct 264468 TTCTCGCGCCGTCTGGTGATGTTCGGCACTACCAATCAGGAAGAGTTTCTGGCCGACGAA 264527 Query 2898 ACCGGTAATCGGCGTTGGCTGCCCGTTGC-AGTTGGAAAAATGGATGTAGAAGGTATCAA 2956 ||||| || ||||||||| | ||| ||| ||||| || ||| | |||| | ||||| Sbjct 264528 ACCGGCAACCGGCGTTGG-TTACCGCTGCGCGTTGGTAAGATGCGTTTAGACGACATCAA 264586 Query 2957 AAAGGATGTCATTCAACTTTGGGCTGA 2983 | ||||| || || || ||||| || Sbjct 264587 ACGCGATGTGATGCAGCTATGGGCCGA 264613 >seq1391 Length=1689 Score = 158 bits (174), Expect = 3e-34 Identities = 169/220 (77%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 32212 TTATACTTA-CCTAAACACGGGAGGATTACTTATGGGTCAGGTTGCATTTGATGCACTAC 32270 ||| |||| |||||||| |||||||| | ||||| || || ||||||||| || | | Sbjct 365 TTACACTTGGCCTAAACA--GGAGGATTTCC-ATGGGCCAAGTCGCATTTGATACATTGC 421 Query 32271 AAGCATCGGAAGAACTAGAAAGTGCTGGTATTTCTAGAGAAAAGGCTAGAGCTATCTCAC 32330 | || || ||||| || |||| ||||| || |||||||| ||||||| ||||| || | Sbjct 422 AGGCGTCAGAAGAGCTTGAAACCGCTGGCATCTCTAGAGAGCAGGCTAGGGCTATTTCGC 481 Query 32331 TGGTAGTACGCAAATCGCATGACGTTGCTAATGTAGCGACTAAAGCGGATATTGCAGAAG 32390 | || || ||||| || ||||| || || |||| || || ||||| ||||| || || | Sbjct 482 TCGTTGTGCGCAAGTCTCATGAGGTGGCGGATGTGGCTACCAAAGCTGATATCGCTGAGG 541 Query 32391 TTAAGCGTGATATTGCTGATGTTCGTAAAGACTTATCTGC 32430 | ||||||||||| || ||||| ||||| ||| |||| || Sbjct 542 TAAAGCGTGATATAGCCGATGTCCGTAAGGACCTATCCGC 581 Score = 82.4 bits (90), Expect = 2e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 28351 TCCAGTACGATGACCTGATGGCCCAGGGCAAAAAGCCGTGCGTGTTCGCGTAATTGGTAA 28410 ||||| |||||||||| | ||||| || ||||| ||||||||||| ||| | Sbjct 1477 TCCAGAACGATGACCTCACACCCCAGCGCCCTGAGCCGGTCGTGTTCGCGTTGCTGGGAG 1536 Query 28411 GGGGTAGGTTTTTCGCCCGGTGCTTTACACTCCACAAAAATAATCTTGCCATTGGGCAGG 28470 || | ||||| ||||| ||||| || |||||||| | | | ||| ||||| | Sbjct 1537 GGCCGGGCTTTTTGCCCCGGCGCTTTGCATTCCACAAACAGCACCCGGCCGCCGGGCAAG 1596 Query 28471 GCGACTAATCGGTCAGGCACGCCTCGTCGTCCGGGTGAAACGAATTTATAGGCAATACCG 28530 |||||| || |||||||| || | | || || || || || || ||||| || ||| Sbjct 1597 ACGACTAGGCGATCAGGCACACCCAGCCTGCCCGGCGACACAAACTTGTAGGCGATGCCG 1656 Query 28531 CCG 28533 ||| Sbjct 1657 CCG 1659 >seq1308 Length=4734 Score = 125 bits (138), Expect = 2e-24 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 32221 CCTAAACACGGGAGGATTACTTATGGGTCAGGTTGCATTTGATGCACTACAAGCATCGGA 32280 |||| ||| |||||||| ||||| || |||||||||||| || | || || || || Sbjct 3937 CCTAGACA--GGAGGATTTTCCATGGGCCAAGTTGCATTTGATACATTGCAGGCGTCAGA 3880 Query 32281 AGAACTAGAAAGTGCTGGTATTTCTAGAGAAAAGGCTAGAGCTATCTCACTGGTAGTACG 32340 ||| || |||| ||||| || |||||||| | || || || || || || || ||||| Sbjct 3879 AGAGCTTGAAACCGCTGGCATCTCTAGAGAGCAAGCCAGGGCGATTTCGCTCGTCGTACG 3820 Query 32341 CAAATCGCATGACGTTGCTAATGTAGCGACTAAAGCGGATATTGCAGAAGTTAAGCGTGA 32400 ||| || ||||| || ||| |||| || ||||| || ||||| || || || || || | Sbjct 3819 CAAGTCTCATGAAGTGGCTGATGTGGCTACTAAGGCTGATATCGCTGAGGTAAATCGGAA 3760 Query 32401 TATTGCTGATGTTCGTAAAGA 32421 | | || ||||| ||||| || Sbjct 3759 TGTCGCCGATGTCCGTAAGGA 3739 >seq362 Length=5845 Score = 98.7 bits (108), Expect = 2e-16 Identities = 145/201 (72%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 32224 AAACACGGGAGGATTACTTATGGGTCAGGTTGCATTTGATGCACTACAAGCA-TCG--GA 32280 ||| || ||||| || |||||| || |||||||||||| ||| |||| | ||| || Sbjct 2357 AAAAACAGGAGGTTTCGCTATGGGCCAAGTTGCATTTGAT--ACT-CAAGAATTCGTCGA 2413 Query 32281 AGAACTAGAAAGTGCTGGTATTTCTAGAGAAAAGGCTAGAGCTATCTCACTGGTAGTACG 32340 | |||||||| ||||| | | | ||| |||| ||||| || || | | || || Sbjct 2414 AACACTAGAAAACGCTGGGTTGCCGAAAGATCAGGCAAGAGCGATTTCTATCGCTGTTCG 2473 Query 32341 CAAATCGCATGACGTTGCTAATGTAGCGACTAAAGCGGATATTGCAGAAGTTAAGCGTGA 32400 ||| || || || || || |||||||||| || ||||||| | || || || || || Sbjct 2474 CAAGTCACACGAAGTGGCGGATGTAGCGACGAAGTCGGATATCACCGAGGTAAAACGCGA 2533 Query 32401 TATTGCTGATGTTCGTAAAGA 32421 |||||| ||||| ||||| || Sbjct 2534 TATTGCCGATGTCCGTAAGGA 2554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116752806956232