Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq116 96.9 3e-15
>seq116
Length=862150
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| || | ||| || |||||||| ||||| || || | || || || | || ||
Sbjct 484295 CACCAAGTGAAGAGTAGATTCCTTTTGTATGTTGTAATCAGACAATGTGCGGCCATCTTC 484236
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|| ||||||||| ||| | || | | ||||||||| || | |||||||||||
Sbjct 484235 CAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTCCTG 484176
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
||| ||| ||| || | ||| ||| || || || ||||| || || || ||
Sbjct 484175 GATTTTTGCTTTAACGTTTTCGATAGTGTCTGACGGTTCTACTTCCAAAGTGATCGTTTT 484116
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| || ||||| |||||||||||||||
Sbjct 484115 TCCGGTCAAAGTTTTAACAAATATTTGCATT 484085
Score = 84.2 bits (92), Expect = 2e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| || || || | | ||||| |||||| ||||| |||||||| ||||| || || |
Sbjct 484086 TTCCACCGCGGAGACGCAACACCAAATGCAATGTGGATTCCTTTTGTATGTTGTAATCAG 484027
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || || | || |||| ||||||||| ||| | || | | ||||||||| |
Sbjct 484026 ACAATGTGCGGCCATCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGAG 483967
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATC 21115
| | ||||||||||| ||| ||| ||| || | ||| ||||||
Sbjct 483966 GAATACCTTCCTTGTCCTGGATTTTTGCTTTAACGTTTTCGATAGTATC 483918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422250317513816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |