Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq26 149 4e-31 >seq26 Length=2133956 Score = 149 bits (164), Expect = 4e-31 Identities = 283/413 (69%), Gaps = 4/413 (1%) Strand=Plus/Minus Query 97065 ATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATG 97124 ||||||||| | ||| || |||||| | ||| || || || || | || | ||| Sbjct 713523 ATAAATGTGCGTATCGCCGGTAGTGTGTACAAAATCGCCTGGTTTTAGGCCGGTTAGATG 713464 Query 97125 GGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCAT 97184 || |||||| | ||||||| | ||| || || ||||| || || || || ||||| Sbjct 713463 TGCAATCATAGACGTTAATAATGCATACGATGCTATATTAAATGGGACACCCAGCCCCAT 713404 Query 97185 ATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACT 97244 ||| || | ||||| | ||||| || |||| || ||||| ||||| Sbjct 713403 ATCGGCACTGCGCTGATAAAGTTGACATGACAGCTCATTATTGGCTACATAGAACTGGGC 713344 Query 97245 CAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACAT 97304 ||| ||| ||||| || || ||||||||||| | ||||| ||||||| ||| Sbjct 713343 CAAGCAATGGCAGGGTGGTAAGGCCATTTTTGGTATATCTACTGGGTTCCAAGAGGACAA 713284 Query 97305 CAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATC 97364 | ||| | | ||| || || ||||| ||| || ||||||||||||| |||||||| Sbjct 713283 AATCATACGCCGATCTGTAGGATTTGTAGTTATTGTCCTAATTATCTGCTTCAATTGATC 713224 Query 97365 AACGCCTTCTCCACCATAATTGT-GC-TTAAGACCTTGATATTCTGCTCCAAAATGCCTC 97422 || || || ||||||| | | || ||| | |||||| ||| |||||||| | | Sbjct 713223 GACTCCCTCCGTACCATAAGTATCGCGACAAGTAC--GATATTGTGCCCCAAAATGGCGC 713166 Query 97423 CATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACC 97475 ||||| || || |||| || || | ||| |||||||| | ||||| ||| || Sbjct 713165 CATTGAAAACCGTAAATTGGCCCCAAGTCGCCTTCTTCGCGATCACTGAACCC 713113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346776705181820