Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq36 93.3 8e-14
seq31 91.5 3e-13
>seq36
Length=1779304
Score = 93.3 bits (102), Expect = 8e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496
|| |||||| | ||||||| | | ||| |||| || || ||| || ||||||||
Sbjct 1521832 ACCCATGATGATTTATGGAATTCAGCCCAACTGCAATTGATGCAAGAGGGTAAAATGCAC 1521773
Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556
| ||||| || |||||||||||||| ||||| | |||||| ||| || |||||||||
Sbjct 1521772 GGCTTTTTGCGTATGTATTGGGCTAAAAAGATTTTAGAATGGTCTAAAAGCCCTGAAGAC 1521713
Query 189557 GCTTTG 189562
||||||
Sbjct 1521712 GCTTTG 1521707
>seq31
Length=2008811
Score = 91.5 bits (100), Expect = 3e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 135731 TATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCATTT 135790
||||||||||| | || | || | ||| | || |||||| || ||||| || | |
Sbjct 484164 TATGCGATAATCTTCTTATGTGCGTAGTACGTGCGTGGGATTTGAAAAAACCGCTTTTAT 484105
Query 135791 TCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACAGAAAAACATATAGATA 135850
| || ||||| |||||||| | |||| || ||||| |||||| | || || |||
Sbjct 484104 TTTGCCCTGCTATGAATACGCGCATGTATGATCATCCAATTACATCGGATCAAATTAATA 484045
Query 135851 CGTTAAAATATATGGGTTTCATAGAAATAGAATGCATAGaaaaaaaaCTAGCATGTGGAG 135910
||||||| | ||| | | |||||| | | |||| ||| | ||| |||||| |
Sbjct 484044 AATTAAAATCTTGGGGCTACCACGAAATACCAAGTATAGCAAAGACTCTAATATGTGGTG 483985
Query 135911 ACGTAGGAAATGGTGCTATGGCAGAAGTTG 135940
|| || ||||| |||||||| |||||||
Sbjct 483984 ACACTGGCAATGGGGCTATGGCCGAAGTTG 483955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923176882029040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |