Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq32 98.7 1e-15
seq21 89.7 8e-13
>seq32
Length=1919080
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 146074 ATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTG 146133
|||||| || |||||||| ||||||||||| || | || | || ||| || |||||
Sbjct 39216 ATGTAAGGTGGATTCTTTTTGAATATTATAATCGGACAATGTGCGGCCATCTTCCAATTG 39275
Query 146134 TTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187
|||||||| |||||||||| |||||| || || |||||||| ||||| || ||
Sbjct 39276 CTTTCCAGCGAAAATCAATCGTTGCTGGTCGGGTGGAATTCCCTCTTTGTCCTG 39329
>seq21
Length=2241434
Score = 89.7 bits (98), Expect = 8e-13
Identities = 124/173 (72%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 209054 GTAAAAGGAAAAATAGTTGGATTATCTAAAGGATTACACGGATTTCATGTTCATGAATAT 209113
|||| ||| ||||| |||||||||||| |||||||| || ||||||||||| ||||
Sbjct 1381665 GTAACTGGAGAAATAAATGGATTATCTAAGGGATTACATGGTTTTCATGTTCACGAATTC 1381724
Query 209114 GGTGATGTGAGTAATGGTTGTACATCAGCAGGAGAACATTTTAATCCATATAATAGACAA 209173
|| || | ||| || || || || || || | ||||||||||| | |||| | |
Sbjct 1381725 GGGGACAATACTAACGGCTGCACTTCTGCCGGTGCGCATTTTAATCCTTGCAATAAAGAG 1381784
Query 209174 CATGGAGATATTAGTGATAAAATACATCGTCATGTTGGTGATTTTGGTAATGT 209226
||||||| | |||| | | |||||| | |||||||| || |||||
Sbjct 1381785 CATGGAGCACCCACTGATGA---TGAACGTCATATCGGTGATTTGGGCAATGT 1381834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743510358417920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |