Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq26 131 1e-25
>seq26
Length=2133956
Score = 131 bits (144), Expect = 1e-25
Identities = 374/566 (66%), Gaps = 8/566 (1%)
Strand=Plus/Plus
Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272
|||| || || ||||| || | || || ||||||||| | |||||||| || |||||
Sbjct 713129 AAGAAGGCGACTTGGGGCCAATTTACGGTTTTCAATGGCGCCATTTTGGGGCACAATATC 713188
Query 20273 TTGACATGAACACAAATTATTTTGG-AC--AAGGAGTAGATCAATTACAAAATGTTATTA 20329
| || || | | | | || ||| || | ||||| |||||||| | | | ||||
Sbjct 713189 GT-ACTTGT-CGCGA-TACTTATGGTACGGAGGGAGTCGATCAATTGAAGCAGATAATTA 713245
Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389
||| | || || || | || | | || ||||| | | | |||||| | ||
Sbjct 713246 GGACAATAACTACAAATCCTACAGATCGGCGTATGATTTTGTCCTCTTGGAACCCAGTAG 713305
Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTT-TACGTTGCTAAT 20448
|| | || |||||| || || || || ||| |||| ||| | || || || || |||
Sbjct 713306 ATATACCAAAAATGGCCTTACCACCCTGCCAT-TGCTTGGCCCAGTTCTATGTAGCCAAT 713364
Query 20449 AATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTC 20508
||||| |||| |||||| | ||||| || || |||||||| |||||||| || ||
Sbjct 713365 AATGAGCTGTCATGTCAACTTTATCAGCGCAGTGCCGATATGGGGCTGGGTGTCCCATTT 713424
Query 20509 AATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACG 20568
||||| ||| ||||| | | |||| ||||||||||||| | || | ||||| |
Sbjct 713425 AATATAGCATCGTATGCATTATTAACGTCTATGATTGCACATCTAACCGGCCTAAAACCA 713484
Query 20569 GGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTA 20628
|| || || || ||||| | || || |||| ||||| | ||||| |||| ||
Sbjct 713485 GGCGATTTTGTACACACTACCGGCGATACGCACATTTATAAAACGCATATCCAACCATTG 713544
Query 20629 AAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTT 20688
||| || |||||||| |||| | |||||| | | || | || | ||
Sbjct 713545 AAAGAGCAATTAACACGCAAACCGCATGCATTCCCTAAATTGATAATAAAACGTGCCGTG 713604
Query 20689 AAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAAT 20748
|| ||||| | ||||| || |||||| | | | | ||||||||| ||
Sbjct 713605 GAAAATATTGAGGATTTCAAGTACTCTGATTTCGAAATTGTGGACTATAATCCCTATCCA 713664
Query 20749 TCAATTCCAATGGAAATGTCTGTTTA 20774
||||| |||||||||| |||| ||
Sbjct 713665 AAAATTCAAATGGAAATGGCTGTGTA 713690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399175602915070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |