Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq512 275 6e-69
>seq512
Length=181763
Score = 275 bits (304), Expect = 6e-69
Identities = 485/705 (69%), Gaps = 4/705 (1%)
Strand=Plus/Minus
Query 14023 TTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCAT 14082
||| ||||| || | ||| |||| | || ||||||| | |||| || | |||||
Sbjct 52840 TTCCAATAGCAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCAT 52781
Query 14083 ACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTC 14142
|| |||| | || || | | || ||||| |||||||| || ||| || ||
Sbjct 52780 GCCAATTAAGTCGACTGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTCACGGCATC 52721
Query 14143 GTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAA 14202
|||| || | ||| ||| ||| || | | ||| ||||||||| |||||
Sbjct 52720 TGTTATTATCTCCAAAATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACATTAA 52661
Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262
|||||| ||||| || | ||| ||||| | || | ||| || || ||||||||
Sbjct 52660 TACCGCAAATTCACAGTGTAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGTTAA 52601
Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322
|||||||| | ||| ||||| |||| ||||||||| | ||||| || ||||||
Sbjct 52600 ACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGATGCGAAGCTGCCACTAAAGAA 52541
Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGA 14382
|| || || || ||||| || ||||| | ||||| ||||| ||| | ||
Sbjct 52540 AATACCTTCGACGGCAGCGAAAGCTATGACACGTTCACCAAAATTAGCTGAATGCGATGA 52481
Query 14383 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442
||||||| | ||||||||| | || || |||| || |||||| |||||||||||
Sbjct 52480 TATCCATGCTAGAGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATAGCATT 52421
Query 14443 AAATAAATGTTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14500
||||| || ||| |||| | | | | ||| || |||| || |||||||| ||||||
Sbjct 52420 AAATAGATATTCACGTTCTTTCTCATCCATGATAT--ATGTTTCGATAAGTAAACTATAC 52363
Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560
||||| ||||| | |||||||| || || |||||||||||||| || | |||||| |
Sbjct 52362 ATTTCCGAGTGCACATTTTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCAGTT 52303
Query 14561 CATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620
||| |||||| | |||||| ||| | ||||| |||||||| |||||||| ||
Sbjct 52302 ATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCC 52243
Query 14621 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAA 14680
|||||||| ||||| | | | |||||| | | || | | || | ||||||
Sbjct 52242 GCAAAAAAAGCCAAGACATGTGAAATAAAATGACGTTCGCCGTCACTTAACCGATTCCAA 52183
Query 14681 TCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725
||| | | || ||||| || || || || ||| | |||||||||
Sbjct 52182 TCGTCCATGTCTTTAGAGAGGTCAACCTCTTCAGCAGTCCAAAAA 52138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482335193393680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |