Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq216 100 4e-16 >seq216 Length=471420 Score = 100 bits (110), Expect = 4e-16 Identities = 125/170 (74%), Gaps = 5/170 (3%) Strand=Plus/Minus Query 172381 ACCACTCTATCATATTATAGCCTAGAATTTCTAAATCTCCTCTTCTTGATTCAACACCTT 172440 ||||||| || |||||||| || | ||||||| || |||| || | | ||||||||| Sbjct 211557 ACCACTCGATTATATTATAACCCATTATTTCTAGGTCACCTCGCCTAGTTGCAACACCTT 211498 Query 172441 GATGGCTATCTCTGCTTGTATATTTTAATGTACCATTATGTGCTTTTTTAGGATCTGGTT 172500 |||| ||||||| |||||||| || || |||||||| |||||||| |||||||| Sbjct 211497 GATGAGCATCTCTGGATGTATATTCTATAGTCCCATTATGCATTTTTTTAGTATCTGGTT 211438 Query 172501 GATAAATGT----TACTATAACGAGAACATAATCCAAAATCAACTAAATA 172546 | || | | | |||| ||||| || ||| |||| |||||||| Sbjct 211437 TA-AAGTCTTTTGTCGTATAGCGAGATGCCAACCCATAATCGACTAAATA 211389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679799733004320