Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq26 113 9e-20
seq162 86.0 1e-11
>seq26
Length=2133956
Score = 113 bits (124), Expect = 9e-20
Identities = 409/629 (65%), Gaps = 17/629 (3%)
Strand=Plus/Plus
Query 35175 TATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCA 35234
|||| || ||||| | || ||| ||||| | | ||||| | ||||| ||| | |
Sbjct 712916 TATCTATATTTGGTGCTCAGATGCGGTTCAATATGCGAGA----ATCATTCCCGTTATTA 712971
Query 35235 CTACCAAGAAAATT-TTCTGGAGAGGAGTTGTG-GAAGAACT-CTCGTGGTTCATCAGGG 35291
| ||| |||| | |||||| | | ||| ||| ||||| || ||| ||||| || || |
Sbjct 712972 ACAACAAAAAAAGTGTTCTGGCGTGCAGT-GTGTGAAGAGCTTCTC-TGGTTTATAAGCG 713029
Query 35292 GCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGT 35351
||| || || || |||| | || || || || ||||||||||| | ||| |
Sbjct 713030 GCAGCACCGATGCGAAAGTCCTACAGAACAAAAACATTCACATCTGGAATGGTAACGCTA 713089
Query 35352 CGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCG 35411
|| |||||| |||| || | ||||| ||| | | ||| || || ||||| ||
Sbjct 713090 GTCGTGAATTTCTGGATAGATGCGGGTTCAGTGATCGCGAAGAAGGCGACTTGGGGCCAA 713149
Query 35412 TATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATA 35471
| ||||| || |||||||| |||||||| || ||||| ||| ||| |||| |
Sbjct 713150 TTTACGGTTTTCAATGGCGCCATTTTGGGGCACAATATCGTACTTGTCG---CGATACTT 713206
Query 35472 CTGGAA---AGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAG 35528
||| | |||| | ||||||||| | ||| | | ||| | | ||||||
Sbjct 713207 ATGGTACGGAGGGAGTCGATCAATTGAAGCAGATAATTAGGACAATAACTACAAATCCTA 713266
Query 35529 ATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTC 35588
||| | | |||||| || | | ||||| || | ||| | | ||||| | |
Sbjct 713267 CAGATCGGCGTATGATTTTGTCCTCTTGGAACCCAGTAGATATACCAAAAATGGCCTTAC 713326
Query 35589 CTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTG 35647
| || ||||| || || | || || ||||| || ||| || |||| || || |
Sbjct 713327 CACCCTGCCAT-TGCTTGGCCCAGTTCTATGTAGCCAATAATGAGCTGTCATGTCAACTT 713385
Query 35648 TATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTCTCTT 35707
|||||||| || | ||| | ||| |||| || || || ||||| ||||| || | |
Sbjct 713386 TATCAGCGCAGTGCCGATATGGGGCTGGGTGTCCCATTTAATATAGCATCGTATGCATTA 713445
Query 35708 CTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAGTTTATCCTCACTCTT 35767
| || | |||| || | | || |||||||| || || ||| | | ||||
Sbjct 713446 TTAACGTCTATGATTGCACATCTAACCGGCCTAAAACCAGGCGATTTTGTACACACTACC 713505
Query 35768 GGTGACGCACACATTTATAATACCCACAT 35796
|| || | ||||||||||| || || ||
Sbjct 713506 GGCGATACGCACATTTATAAAACGCATAT 713534
>seq162
Length=626193
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 94921 GTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGAT 94980
|| ||||||||||| ||||| || | ||||||||||| ||| |||||||| | | |
Sbjct 499285 GTTGGGGAAGCATGAGTAAAGTAACCCTCCGACATGAGATTATAAGTTTCAATAGCCGCT 499226
Query 94981 TTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCA 95040
| ||||| ||||||||||| | ||| |||||||| | ||| | ||| || |||||
Sbjct 499225 TCAATGTCACCGCCGTGAATGCCAATAGCGACACGCATTAACATATGCTGTGGCCGCTCC 499166
Query 95041 AC 95042
||
Sbjct 499165 AC 499164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989562115968330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |