Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_003315.1
Length=31508
Score E
Sequences producing significant alignments: (Bits) Value
seq1316 104 5e-18
seq1308 86.0 1e-12
>seq1316
Length=2468
Score = 104 bits (114), Expect = 5e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 361 TGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCGACT 420
||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||| |||
Sbjct 706 TGGGTCGTGCAGGATTCGAACCTGCGACCAATTGATTAAAAGTCAACTGCTCTACCAACT 765
Query 421 GAGCTAACGACCCAATTAGATGATTT-TAAAGTAAATTTTA 460
||||||||||||| || | |||| |||||||| ||||
Sbjct 766 GAGCTAACGACCC-TGTACTTAATTTAAAAAGTAAAATTTA 805
>seq1308
Length=4734
Score = 86.0 bits (94), Expect = 1e-12
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 353 ATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTC 412
|| |||||||||| ||| ||| |||||||| ||||| | ||||||| ||||| ||||||
Sbjct 3549 ATAATTGGTGGGTTGTGCAGGGCTCGAACCTGCGACCGATGGATTAAGAGTCCACTGCTC 3608
Query 413 TACCGACTGAGCTAACGACC 432
| || ||||||||||| |||
Sbjct 3609 TGCCAACTGAGCTAACAACC 3628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 100701935945640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |