Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq985 105 2e-18 seq429 91.5 4e-14 >seq985 Length=1952 Score = 105 bits (116), Expect = 2e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 17158 GGCCCTTTAGCTAAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 17217 |||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||| Sbjct 1752 GGCCCTTTAGCTCAGTGGTAAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAAT 1811 Query 17218 CCAGCAAGGGCCA 17230 ||||||||||||| Sbjct 1812 CCAGCAAGGGCCA 1824 >seq429 Length=112147 Score = 91.5 bits (100), Expect = 4e-14 Identities = 92/116 (79%), Gaps = 4/116 (3%) Strand=Plus/Plus Query 9609 CAGAATTATGGTGGGCTGGGCAGGGGAGCCGAAAGGCTCGCCGGTTTCCTTGAGCGCCGG 9668 |||||| |||||||||||| ||||||||| |||||||||||| ||||| ||||| Sbjct 6319 CAGAATAATGGTGGGCTGGATGGGGGAGCCGCAAGGCTCGCCGG-GTCCTTCTTAGCCGG 6377 Query 9669 TAGTTCCAACCCTGTTCAGTCCGCCACCA--GCGAGCTTGGAACCTC-CGGTGGTG 9721 |||| ||||||||||||| |||||||| ||| ||| ||||| ||||||| Sbjct 6378 TAGTCTCAACCCTGTTCAGCTCGCCACCAATATGAGTTTGAGACCTCTAGGTGGTG 6433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136115610083244