Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq512 262 4e-65
>seq512
Length=181763
Score = 262 bits (290), Expect = 4e-65
Identities = 486/708 (69%), Gaps = 10/708 (1%)
Strand=Plus/Minus
Query 13691 TTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCAT 13750
||| ||||| || | ||| |||| | | || ||||||| | |||| || | |||||
Sbjct 52840 TTCCAATAGCAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCAT 52781
Query 13751 ACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTC 13810
|| |||| | || || | | || ||||| |||||||| || ||| || ||
Sbjct 52780 GCCAATTAAGTCGACTGGTAAGGCTTCTGTCAAAAACTCTTTTTCAATTTTCACGGCATC 52721
Query 13811 TTTTATAATAATTGTAATAATC---TCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
| |||| || | || |||| || ||| || | | ||| ||||||||| ||
Sbjct 52720 TGTTATTATC--TCCAA-AATCCGTTCTTTACTCGGTTTTTGTATTAAATGTTTAAACAT 52664
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
||| |||||| ||||| || | ||| ||||| | || | ||| || || |||||
Sbjct 52663 TAATACCGCAAATTCACAGTGTAAGCCTTCATCGCGTGATATCATTTCATTAGAGAATGT 52604
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAA 13987
||| |||||||| | ||| ||||| |||| ||||||||| | || || || |||
Sbjct 52603 TAAACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGATGCGAAGCTGCCACTAAA 52544
Query 13988 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14047
||| || || || || ||||| || ||||| | ||||| ||||| ||| |
Sbjct 52543 GAAAATACCTTCGACGGCAGCGAAAGCTATGACACGTTCACCAAAATTAGCTGAATGCGA 52484
Query 14048 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14107
||||||||| | ||||||||| | || || |||| || |||||| ||||||||
Sbjct 52483 TGATATCCATGCTAGAGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATAGC 52424
Query 14108 ATTAAATAAATATTCC--TTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14165
|||||||| |||||| |||| | | | | ||| || |||| || |||||||| |||
Sbjct 52423 ATTAAATAGATATTCACGTTCTTTCTCATCCATGATAT--ATGTTTCGATAAGTAAACTA 52366
Query 14166 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCC 14225
|||||||| ||||| | |||||||| || || ||||||||||||||||| | ||||||
Sbjct 52365 TACATTTCCGAGTGCACATTTTCCATGGCAATTTGAAAACCATAAAAGCAACGAGCTTCA 52306
Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
| ||| || || | |||||| ||| | ||||| |||||||| ||||||||
Sbjct 52305 GTTATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGAT 52246
Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTC 14345
|| |||||||| ||||| | | | |||||| | | || | | | | |||
Sbjct 52245 GCCGCAAAAAAAGCCAAGACATGTGAAATAAAATGACGTTCGCCGTCACTTAACCGATTC 52186
Query 14346 CAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14393
|||||| | || ||||| || || || || ||| | |||||||||
Sbjct 52185 CAATCGTCCATGTCTTTAGAGAGGTCAACCTCTTCAGCAGTCCAAAAA 52138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479717649868400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |