Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq298 127 5e-25 >seq298 Length=289783 Score = 127 bits (140), Expect = 5e-25 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 308 CGCCTGGTGGAAATAGACCAGATGGATGTGATCGACATCCTTAACGATGACATGAGTATC 367 || ||| ||||||| ||| | ||||||||| ||||| ||| |||| || || | || Sbjct 269361 CGTCTGCTGGAAATCGACAACATGGATGTGGCGGACATTCTTGACGAAGAGCTGCGCGTC 269420 Query 368 AAGCCGGTTTCCGAATGGCCTAAGGTCTGGCGTCAGTATCTTACCGGTTTCGAGCTGGCC 427 | ||| | | |||||||| | |||||| | ||||| | || | || ||||| Sbjct 269421 AGGCCCCTGGCGGAATGGCCGGCCGCCTGGCGCCGCTATCTGAGTGGCGTTGATTTGGCC 269480 Query 428 GACATGTTCGAAGGCCGCGGCGACGAGAAAGAACTTGTTGGCATACTCaaaaaaaTAAAA 487 || ||||| || ||| | ||||| | | || |||| || | |||||||| ||| Sbjct 269481 GAGATGTTTGAGGGCAGAGGCGAGGCGCGTGATGCCATTGGTATTTTGAAAAAAATCAAA 269540 Query 488 TGGCCTGACAAGGTGAAGAACCTCGAGCTTATTGGTAAGCACGTCGACGTCAACGCGTTC 547 ||||| |||||||| |||||||| ||||| | || ||||||||| ||| | |||||| Sbjct 269541 TGGCCGGACAAGGTAAAGAACCTGGAGCTGCTAGGGAAGCACGTCAGTGTCCAGGCGTTC 269600 Query 548 AAAGA 552 ||||| Sbjct 269601 AAAGA 269605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126823000550796