Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_004775.1
Length=39671
Score E
Sequences producing significant alignments: (Bits) Value
seq298 127 5e-25
>seq298
Length=289783
Score = 127 bits (140), Expect = 5e-25
Identities = 175/245 (71%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 308 CGCCTGGTGGAAATAGACCAGATGGATGTGATCGACATCCTTAACGATGACATGAGTATC 367
|| ||| ||||||| ||| | ||||||||| ||||| ||| |||| || || | ||
Sbjct 269361 CGTCTGCTGGAAATCGACAACATGGATGTGGCGGACATTCTTGACGAAGAGCTGCGCGTC 269420
Query 368 AAGCCGGTTTCCGAATGGCCTAAGGTCTGGCGTCAGTATCTTACCGGTTTCGAGCTGGCC 427
| ||| | | |||||||| | |||||| | ||||| | || | || |||||
Sbjct 269421 AGGCCCCTGGCGGAATGGCCGGCCGCCTGGCGCCGCTATCTGAGTGGCGTTGATTTGGCC 269480
Query 428 GACATGTTCGAAGGCCGCGGCGACGAGAAAGAACTTGTTGGCATACTCaaaaaaaTAAAA 487
|| ||||| || ||| | ||||| | | || |||| || | |||||||| |||
Sbjct 269481 GAGATGTTTGAGGGCAGAGGCGAGGCGCGTGATGCCATTGGTATTTTGAAAAAAATCAAA 269540
Query 488 TGGCCTGACAAGGTGAAGAACCTCGAGCTTATTGGTAAGCACGTCGACGTCAACGCGTTC 547
||||| |||||||| |||||||| ||||| | || ||||||||| ||| | ||||||
Sbjct 269541 TGGCCGGACAAGGTAAAGAACCTGGAGCTGCTAGGGAAGCACGTCAGTGTCCAGGCGTTC 269600
Query 548 AAAGA 552
|||||
Sbjct 269601 AAAGA 269605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126823000550796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |