Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12]
1,726 sequences; 357,332,231 total letters
Query= NC_005056.1
Length=32684
Score E
Sequences producing significant alignments: (Bits) Value
seq1361 84.2 5e-12
>seq1361
Length=1863
Score = 84.2 bits (92), Expect = 5e-12
Identities = 172/253 (68%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 24217 AATGACTATGTGATTCAGTACCCGATTGATGCGGTACATACGGTTAAGTTTGCAGAGTTA 24276
|||||||| | | || | || ||| |||| || || | | |||||| | ||| |
Sbjct 257 AATGACTACGAGGTTAAATATCCGCTTGACGCAGTCAGTGTAGAAAAGTTTTCCGAGCTG 198
Query 24277 CTTGGTAAGCCAGAAACGGCTGTAGTCAAGATGGTAAAAGAGAATAAATTGCCAGTTATT 24336
|| || ||||||||||| ||||| |||||| ||| | || |||||||| || ||
Sbjct 197 CTCGGAAAGCCAGAAACCGCTGTCAGGAAGATGATAATTAACAACAAATTGCCTGTCGTT 138
Query 24337 GAGCTTCGTGAT-CCAAGTAAGCCGAACGCTCGTGTCGGTGAGAAGTGGGTTTTCATTCC 24395
||| | ||| || || ||| | || ||||| ||||| ||||| |||| |
Sbjct 137 GAGTTAACCGATCCCGAGGCAGCTG-CGGCGCGTGTTGGTGAACGCTGGGTAGTCATCTC 79
Query 24396 AGAGTTTAATCGCGCTGTACGAGAGGCGTTTTATAACCGACCAGTTGAACAGCGTGATGC 24455
||| ||||||||| || | || || | ||| |||| || | ||| | ||||||||
Sbjct 78 AGAATTTAATCGCAGAGTCCTTGAAGCTTATTACAACCATCCCGCAGAAGAACGTGATGC 19
Query 24456 ATGGCTTTTGTGG 24468
|||||| ||||
Sbjct 18 TTGGCTTAAGTGG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104465058814152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |