Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20pallidipes_20[genbank_20GCA_5F000688715.1_202014-05-12] 1,726 sequences; 357,332,231 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq1361 84.2 5e-12 >seq1361 Length=1863 Score = 84.2 bits (92), Expect = 5e-12 Identities = 172/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 24217 AATGACTATGTGATTCAGTACCCGATTGATGCGGTACATACGGTTAAGTTTGCAGAGTTA 24276 |||||||| | | || | || ||| |||| || || | | |||||| | ||| | Sbjct 257 AATGACTACGAGGTTAAATATCCGCTTGACGCAGTCAGTGTAGAAAAGTTTTCCGAGCTG 198 Query 24277 CTTGGTAAGCCAGAAACGGCTGTAGTCAAGATGGTAAAAGAGAATAAATTGCCAGTTATT 24336 || || ||||||||||| ||||| |||||| ||| | || |||||||| || || Sbjct 197 CTCGGAAAGCCAGAAACCGCTGTCAGGAAGATGATAATTAACAACAAATTGCCTGTCGTT 138 Query 24337 GAGCTTCGTGAT-CCAAGTAAGCCGAACGCTCGTGTCGGTGAGAAGTGGGTTTTCATTCC 24395 ||| | ||| || || ||| | || ||||| ||||| ||||| |||| | Sbjct 137 GAGTTAACCGATCCCGAGGCAGCTG-CGGCGCGTGTTGGTGAACGCTGGGTAGTCATCTC 79 Query 24396 AGAGTTTAATCGCGCTGTACGAGAGGCGTTTTATAACCGACCAGTTGAACAGCGTGATGC 24455 ||| ||||||||| || | || || | ||| |||| || | ||| | |||||||| Sbjct 78 AGAATTTAATCGCAGAGTCCTTGAAGCTTATTACAACCATCCCGCAGAAGAACGTGATGC 19 Query 24456 ATGGCTTTTGTGG 24468 |||||| |||| Sbjct 18 TTGGCTTAAGTGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104465058814152